RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 COL6A3P12111 3177 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 A0A0U1RQF3 1178 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 VWA3AA6NCI4 1184 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 NT5C1B-RDH14C9J2C7 533 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 TNFRSF10AO00220 468 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 LAD1O00515 517 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 NCK2O43639 380 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 LYPLA2O95372 231 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 PDCP20941 246 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 RPA1P27694 616 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 NRIP1P48552 1158 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 CAPSQ13938 189 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 PPP2R5AQ15172 486 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 KCNT2Q6UVM3 1135 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 HSCBQ8IWL3 235 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 ASAP3Q8TDY4 903 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 RPS6KC1Q96S38 1066 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 HSD17B14Q9BPX1 270 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 TCF25Q9BQ70 676 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 ADPGKQ9BRR6 497 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 POLR3CQ9BUI4 534 aaPredicted RBP10.06□□□□□ -0.8
CMTM1-210ENST00000528441 C2orf40Q9H1Z8 148 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 BHMT2Q9H2M3 363 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 TLE6Q9H808 572 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 RSAD1Q9HA92 442 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 GPRC5CQ9NQ84 441 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 PARP2Q9UGN5 583 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 DNM3Q9UQ16 869 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 PCDHB2Q9Y5E7 798 aa10.06□□□□□ -0.8
CMTM1-210ENST00000528441 PLXNA4Q9HCM2 1894 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 CCDC169A6NNP5 214 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 NR1I2O75469 434 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 NPTXRO95502 500 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 XRCC6P12956 609 aaKnown RBP eCLIP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 GLRA2P23416 452 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 AXLP30530 894 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 UBE3AQ05086 875 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 NOMO2Q5JPE7 1267 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 CLLU1OSQ5K130 101 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 PTCRAQ6ISU1 281 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 LLGL2Q6P1M3 1020 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 CNNM3Q8NE01 707 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 SPPL3Q8TCT6 385 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 MRPS27Q92552 414 aaKnown RBP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 PABPC5Q96DU9 382 aaKnown RBP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 CALML4Q96GE6 196 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 NECAB3Q96P71 396 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 CASD1Q96PB1 797 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 CEP89Q96ST8 783 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 PLIN2Q99541 437 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 IFT122Q9HBG6 1241 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 XPNPEP1Q9NQW7 623 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 PRMT7Q9NVM4 692 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 SPG21Q9NZD8 308 aa10.05□□□□□ -0.8
CMTM1-210ENST00000528441 DBR1Q9UK59 544 aaKnown RBP10.05□□□□□ -0.8
CMTM1-210ENST00000528441 CARNS1A5YM72 827 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PP2D1A8MPX8 630 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PER2O15055 1255 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 POMCP01189 267 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PRKCBP05771 671 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 KRT18P05783 430 aaKnown RBP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 SPATA31C1P0DKV0 1188 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 CDC25AP30304 524 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 IRS1P35568 1242 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 MATR3P43243 847 aaKnown RBP eCLIP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 OR1G1P47890 313 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 BCAR1P56945 870 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PTENP60484 403 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 FAM189BP81408 668 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PRPF4BQ13523 1007 aaKnown RBP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 DHX8Q14562 1220 aaKnown RBP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PCBP1Q15365 356 aaKnown RBP eCLIP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 MAPK6Q16659 721 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 APBB1IPQ7Z5R6 666 aaPredicted RBP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 CDR2LQ86X02 465 aaPredicted RBP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 CCDC51Q96ER9 411 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 BACH2Q9BYV9 841 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 ZHX3Q9H4I2 956 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 CWH43Q9H720 699 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 MINDY3Q9H8M7 445 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 UBN1Q9NPG3 1134 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
CMTM1-210ENST00000528441 PCDHGC5Q9Y5F6 944 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 CNTNAP2Q9UHC6 1331 aa10.04□□□□□ -0.8
CMTM1-210ENST00000528441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.03□□□□□ -0.8
CMTM1-210ENST00000528441 E9PMD0 336 aa10.03□□□□□ -0.8
CMTM1-210ENST00000528441 N4BP3O15049 544 aa10.03□□□□□ -0.8
CMTM1-210ENST00000528441 TSPAN1O60635 241 aa10.03□□□□□ -0.8
CMTM1-210ENST00000528441 BMP15O95972 392 aa10.03□□□□□ -0.8
CMTM1-210ENST00000528441 HARSP12081 509 aaKnown RBP10.03□□□□□ -0.8
CMTM1-210ENST00000528441 IL9P15248 144 aa10.03□□□□□ -0.8
CMTM1-210ENST00000528441 CYP11B2P19099 503 aa10.03□□□□□ -0.8
CMTM1-210ENST00000528441 MUTP22033 750 aa10.03□□□□□ -0.8
CMTM1-210ENST00000528441 GTF2F1P35269 517 aaKnown RBP eCLIP10.03□□□□□ -0.8
CMTM1-210ENST00000528441 ARL2P36404 184 aa10.03□□□□□ -0.8
CMTM1-210ENST00000528441 TXLNAP40222 546 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms