RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SLC4A4Q9Y6R1 1079 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 PLIN4Q96Q06 1357 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 PATE3B3GLJ2 98 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 NCAM2O15394 837 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 MAFO75444 373 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 PAPSS2O95340 614 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 POU3F2P20265 443 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 KLRC2P26717 231 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 ADD2P35612 726 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 NFX1Q12986 1120 aaKnown RBP7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 SEMA3FQ13275 785 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 AMHR2Q16671 573 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 SBK1Q52WX2 424 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 FAM181AQ8N9Y4 354 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 RGS22Q8NE09 1264 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 IWS1Q96ST2 819 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 NT5C3AQ9H0P0 336 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 ATP6V0A4Q9HBG4 840 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 EPB41L4AQ9HCS5 686 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 PXMP2Q9NR77 195 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 TMEM161AQ9NX61 479 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 PCDHGA5Q9Y5G8 931 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 TRPV2Q9Y5S1 764 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 PCNX2A6NKB5 2137 aa7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 ASCC3Q8N3C0 2202 aaKnown RBP7.93□□□□□ -1.14
CTNNA1-216ENST00000519489 COL5A1P20908 1838 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 MYH4Q9Y623 1939 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 GSG1L2A8MUP6 293 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 MINDY4BA8MYZ0 360 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 GOLIM4O00461 696 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 KRT10P13645 584 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 WNT7BP56706 349 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 GRIK4Q16099 956 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 UAP1L1Q3KQV9 507 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 USH1GQ495M9 461 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 CACNA2D4Q7Z3S7 1137 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 DDX53Q86TM3 631 aaKnown RBP7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 LRRC43Q8N309 656 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 SNIP1Q8TAD8 396 aaKnown RBP7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 PIP4K2CQ8TBX8 421 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 GAB3Q8WWW8 586 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 CELF4Q9BZC1 486 aaKnown RBP7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 PUS7LQ9H0K6 701 aaKnown RBP7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 ADAMTS10Q9H324 1103 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 CPVLQ9H3G5 476 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 TUBE1Q9UJT0 475 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 CDH7Q9ULB5 785 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 ST3GAL5Q9UNP4 418 aa7.92□□□□□ -1.14
CTNNA1-216ENST00000519489 MYH15Q9Y2K3 1946 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 LRRK2Q5S007 2527 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 B4DLN1 442 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 OPLAHO14841 1288 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 MEFVO15553 781 aaPredicted RBP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 SSBP05455 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 MRPL12P52815 198 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 POLGP54098 1239 aaPredicted RBP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 PPFIA1Q13136 1202 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 CCDC96Q2M329 555 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 PLK5Q496M5 336 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 TAS1R1Q7RTX1 841 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 PPFIBP1Q86W92 1011 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 SPEM1Q8N4L4 309 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 LSM14AQ8ND56 463 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 ITFG1Q8TB96 612 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 TRAPPC12Q8WVT3 735 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 SPIRE2Q8WWL2 714 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 FGF13Q92913 245 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 IGSF21Q96ID5 467 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 MRGPRX2Q96LB1 330 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 DUSP15Q9H1R2 295 aaPredicted RBP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 ELAC1Q9H777 363 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 MLXIPQ9HAP2 919 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 TMEM9BQ9NQ34 198 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 POLR3BQ9NW08 1133 aaPredicted RBP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 ARPP21Q9UBL0 812 aaPredicted RBP7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 WDR19Q8NEZ3 1342 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 SHROOM3Q8TF72 1996 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 COL6A6A6NMZ7 2263 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 CSMD1Q96PZ7 3565 aa7.91□□□□□ -1.14
CTNNA1-216ENST00000519489 UTP20O75691 2785 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 PLXNB3Q9ULL4 1909 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 ZMYM2Q9UBW7 1377 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 KDM3AQ9Y4C1 1321 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 BCLAF3A2AJT9 711 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 DCLK1O15075 740 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 TEX28O15482 410 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 EXTL3O43909 919 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 RPP40O75818 363 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 CAVIN2O95810 425 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 MYCLP12524 364 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 FSHRP23945 695 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 MARK3P27448 753 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 HOXA6P31267 233 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 NOVP48745 357 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 IGBP1P78318 339 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 IRX4P78413 519 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 TFAP4Q01664 338 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 PFKPQ01813 784 aa7.9□□□□□ -1.14
CTNNA1-216ENST00000519489 ARHGEF16Q5VV41 709 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms