RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 DSG1Q02413 1049 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 LRRC32Q14392 662 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 ZBTB41Q5SVQ8 909 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 LRRC55Q6ZSA7 311 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 SYNE4Q8N205 404 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 EFHBQ8N7U6 833 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 PROKR1Q8TCW9 393 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 CHTF18Q8WVB6 975 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 MRFAP1L1Q96HT8 127 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 PUS7Q96PZ0 661 aaKnown RBP6.74□□□□□ -1.33
LINC01088-203ENST00000507476 PCDHB6Q9Y5E3 794 aa6.74□□□□□ -1.33
LINC01088-203ENST00000507476 TTBK1Q5TCY1 1321 aaPredicted RBP6.74□□□□□ -1.33
LINC01088-203ENST00000507476 GRID2IPA4D2P6 1211 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 NRP1O14786 923 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 TGM5O43548 720 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 KPNA6O60684 536 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 LY86O95711 162 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 ADRA1BP35368 520 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 CASRP41180 1078 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 KIF18BQ86Y91 864 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-203ENST00000507476 CPPED1Q9BRF8 314 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-203ENST00000507476 FDXACB1Q9BRP7 624 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-203ENST00000507476 MTFR1LQ9H019 292 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 ZNF768Q9H5H4 540 aaKnown RBP6.73□□□□□ -1.33
LINC01088-203ENST00000507476 IFT57Q9NWB7 429 aa6.73□□□□□ -1.33
LINC01088-203ENST00000507476 TRIM24O15164 1050 aa6.72□□□□□ -1.33
LINC01088-203ENST00000507476 SEC24DO94855 1032 aaPredicted RBP6.72□□□□□ -1.33
LINC01088-203ENST00000507476 SCAF4O95104 1147 aaKnown RBP6.72□□□□□ -1.33
LINC01088-203ENST00000507476 ABHD16AO95870 558 aa6.72□□□□□ -1.33
LINC01088-203ENST00000507476 LY6G5CQ5SRR4 150 aa6.72□□□□□ -1.33
LINC01088-203ENST00000507476 OR52N2Q8NGI0 321 aa6.72□□□□□ -1.33
LINC01088-203ENST00000507476 LSM14BQ9BX40 385 aaKnown RBP6.72□□□□□ -1.33
LINC01088-203ENST00000507476 THG1LQ9NWX6 298 aaKnown RBP6.72□□□□□ -1.33
LINC01088-203ENST00000507476 LCHNA4D1U4 455 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 AHRRA9YTQ3 701 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 GAS7O60861 476 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 PFKMP08237 780 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 POU3F2P20265 443 aaPredicted RBP6.71□□□□□ -1.34
LINC01088-203ENST00000507476 MRPL49Q13405 166 aaKnown RBP6.71□□□□□ -1.34
LINC01088-203ENST00000507476 PTPAQ15257 358 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 C21orf62-AS1Q17RA5 79 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 METTL24Q5JXM2 366 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 DPY19L2P1Q6NXN4 242 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 KCNV1Q6PIU1 500 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 ESPNLQ6ZVH7 1005 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 MSL3Q8N5Y2 521 aaKnown RBP6.71□□□□□ -1.34
LINC01088-203ENST00000507476 CDYL2Q8N8U2 506 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 OR5M3Q8NGP4 307 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 SREK1Q8WXA9 508 aaKnown RBP6.71□□□□□ -1.34
LINC01088-203ENST00000507476 PDCD2LQ9BRP1 358 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 KCNH6Q9H252 994 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 ZSWIM4Q9H7M6 989 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 MSRAQ9UJ68 235 aa6.71□□□□□ -1.34
LINC01088-203ENST00000507476 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.71□□□□□ -1.34
LINC01088-203ENST00000507476 PCSK5Q92824 1860 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 DNAJC6O75061 913 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 LMNAP02545 664 aaKnown RBP6.7□□□□□ -1.34
LINC01088-203ENST00000507476 FAM189BP81408 668 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 VPS72Q15906 364 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 PLEKHG4Q58EX7 1191 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 IL17RAQ96F46 866 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 MS4A5Q9H3V2 200 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 USP36Q9P275 1121 aaKnown RBP6.7□□□□□ -1.34
LINC01088-203ENST00000507476 PACSIN3Q9UKS6 424 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 USP18Q9UMW8 372 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 CD2APQ9Y5K6 639 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 COL4A3Q01955 1670 aa6.7□□□□□ -1.34
LINC01088-203ENST00000507476 RECQL4O94761 1208 aa6.69□□□□□ -1.34
LINC01088-203ENST00000507476 NEK4P51957 841 aa6.69□□□□□ -1.34
LINC01088-203ENST00000507476 DOK3Q7L591 496 aa6.69□□□□□ -1.34
LINC01088-203ENST00000507476 TAS1R1Q7RTX1 841 aa6.69□□□□□ -1.34
LINC01088-203ENST00000507476 FAM83AQ86UY5 434 aa6.69□□□□□ -1.34
LINC01088-203ENST00000507476 FERMT2Q96AC1 680 aa6.69□□□□□ -1.34
LINC01088-203ENST00000507476 EPC1Q9H2F5 836 aa6.69□□□□□ -1.34
LINC01088-203ENST00000507476 ST20-MTHFSA0A0A6YYL1 179 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 CENPVL1A0A0U1RR11 272 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 A0A1W2PR48 441 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 RHOBTB3O94955 611 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 GYPEP15421 78 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 APOBEC3AP31941 199 aaPredicted RBP6.68□□□□□ -1.34
LINC01088-203ENST00000507476 WNT3AP56704 352 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 TIGD2Q4W5G0 525 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 GPR158Q5T848 1215 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 LRRTM3Q86VH5 581 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 PASD1Q8IV76 773 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 SYNPOQ8N3V7 929 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 GLB1L3Q8NCI6 653 aaPredicted RBP6.68□□□□□ -1.34
LINC01088-203ENST00000507476 SMC1BQ8NDV3 1235 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 GAB3Q8WWW8 586 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 RNPC3Q96LT9 517 aaKnown RBP6.68□□□□□ -1.34
LINC01088-203ENST00000507476 NDC1Q9BTX1 674 aa6.68□□□□□ -1.34
LINC01088-203ENST00000507476 EIF2B4Q9UI10 523 aaKnown RBP6.68□□□□□ -1.34
LINC01088-203ENST00000507476 PRSS38A1L453 326 aa6.67□□□□□ -1.34
LINC01088-203ENST00000507476 LPXNO60711 386 aa6.67□□□□□ -1.34
LINC01088-203ENST00000507476 PPFIA4O75335 1185 aa6.67□□□□□ -1.34
LINC01088-203ENST00000507476 LAG3P18627 525 aa6.67□□□□□ -1.34
LINC01088-203ENST00000507476 GZMKP49863 264 aa6.67□□□□□ -1.34
LINC01088-203ENST00000507476 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
LINC01088-203ENST00000507476 PCBP1Q15365 356 aaKnown RBP eCLIP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms