RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 ZNF280BQ86YH2 543 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 C4orf19Q8IY42 314 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 SLFN12Q8IYM2 578 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 C12orf76Q8N812 135 aaPredicted RBP16.26■□□□□ 0.19
SEC24D-208ENST00000506622 KREMEN2Q8NCW0 462 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 WASF1Q92558 559 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 HAS1Q92839 578 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 ZSWIM4Q9H7M6 989 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 RSAD1Q9HA92 442 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 BMP2KQ9NSY1 1161 aaPredicted RBP16.26■□□□□ 0.19
SEC24D-208ENST00000506622 WRAP73Q9P2S5 460 aaPredicted RBP16.26■□□□□ 0.19
SEC24D-208ENST00000506622 CNTNAP2Q9UHC6 1331 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 CFAP54Q96N23 3096 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 KMT2EQ8IZD2 1858 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 C2CD4DB7Z1M9 353 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 PFKFB2O60825 505 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 WEE2P0C1S8 567 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 EPCAMP16422 314 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 NCBP1Q09161 790 aaKnown RBP16.25■□□□□ 0.19
SEC24D-208ENST00000506622 MTMR3Q13615 1198 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 EMC2Q15006 297 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 XKR9Q5GH70 373 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 AGMOQ6ZNB7 445 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 CABP7Q86V35 215 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 UBALD2Q8IYN6 164 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 OXER1Q8TDS5 423 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 BCL7CQ8WUZ0 217 aaPredicted RBP16.25■□□□□ 0.19
SEC24D-208ENST00000506622 EMILIN2Q9BXX0 1053 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 MINDY3Q9H8M7 445 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 GJB4Q9NTQ9 266 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 DBR1Q9UK59 544 aaKnown RBP16.25■□□□□ 0.19
SEC24D-208ENST00000506622 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 SORCS3Q9UPU3 1222 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 FAN1Q9Y2M0 1017 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 VPS13AQ96RL7 3174 aa16.25■□□□□ 0.19
SEC24D-208ENST00000506622 ERLIN2O94905 339 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 KLRC2P26717 231 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 AVPR2P30518 371 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 HOXA11P31270 313 aaPredicted RBP16.24■□□□□ 0.19
SEC24D-208ENST00000506622 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
SEC24D-208ENST00000506622 ANKRD1Q15327 319 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 KIAA1841Q6NSI8 718 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 FERMT3Q86UX7 667 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 TPH2Q8IWU9 490 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 TDRD5Q8NAT2 981 aaKnown RBP16.24■□□□□ 0.19
SEC24D-208ENST00000506622 RNF149Q8NC42 400 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 CNNM3Q8NE01 707 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 SLC22A17Q8WUG5 538 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 DYDC2Q96IM9 177 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 TMEM175Q9BSA9 504 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 BRMS1Q9HCU9 246 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 UBN1Q9NPG3 1134 aa16.24■□□□□ 0.19
SEC24D-208ENST00000506622 ORC3Q9UBD5 711 aaPredicted RBP16.24■□□□□ 0.19
SEC24D-208ENST00000506622 PTPRZ1P23471 2315 aaPredicted RBP16.24■□□□□ 0.19
SEC24D-208ENST00000506622 DDHD2O94830 711 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 SSBP05455 408 aaKnown RBP eCLIP16.23■□□□□ 0.19
SEC24D-208ENST00000506622 ITGA4P13612 1032 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 VCPP55072 806 aaKnown RBP16.23■□□□□ 0.19
SEC24D-208ENST00000506622 CYP4A11Q02928 519 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 TCF15Q12870 199 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 MXD4Q14582 209 aaPredicted RBP16.23■□□□□ 0.19
SEC24D-208ENST00000506622 PCBP1Q15365 356 aaKnown RBP eCLIP16.23■□□□□ 0.193e-13■■■■■ 36.1
SEC24D-208ENST00000506622 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 TMC5Q6UXY8 1006 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 MTRQ99707 1265 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 IRF2BPLQ9H1B7 796 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 MRPL17Q9NRX2 175 aaKnown RBP16.23■□□□□ 0.19
SEC24D-208ENST00000506622 USTQ9Y2C2 406 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 RIF1Q5UIP0 2472 aaKnown RBP16.23■□□□□ 0.19
SEC24D-208ENST00000506622 ARID2Q68CP9 1835 aa16.23■□□□□ 0.19
SEC24D-208ENST00000506622 NRP1O14786 923 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 ZBTB39O15060 712 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 B4GALT3O60512 393 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 DTNBO60941 627 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 SLITRK3O94933 977 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 BRD1O95696 1058 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 POMCP01189 267 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 NCLP19338 710 aaKnown RBP16.22■□□□□ 0.19
SEC24D-208ENST00000506622 AXLP30530 894 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 KRT2P35908 639 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 AFF1P51825 1210 aaKnown RBP16.22■□□□□ 0.19
SEC24D-208ENST00000506622 TFDP1Q14186 410 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 EARS2Q5JPH6 523 aaKnown RBP16.22■□□□□ 0.19
SEC24D-208ENST00000506622 UBXN11Q5T124 520 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 ZDHHC14Q8IZN3 488 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 PHOX2BQ99453 314 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 VN1R3Q9BXE9 311 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 SFXN1Q9H9B4 322 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 LIMD1Q9UGP4 676 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 PCDHA12Q9UN75 941 aa16.22■□□□□ 0.19
SEC24D-208ENST00000506622 TDRD15B5MCY1 1934 aaKnown RBP16.22■□□□□ 0.19
SEC24D-208ENST00000506622 INO80B-WBP1J3KQ70 363 aa16.21■□□□□ 0.19
SEC24D-208ENST00000506622 CTDNEP1O95476 244 aa16.21■□□□□ 0.19
SEC24D-208ENST00000506622 CNPP09543 421 aaKnown RBP16.21■□□□□ 0.19
SEC24D-208ENST00000506622 NUBP1P53384 320 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms