RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 FAM177A1Q8N128 213 aaPredicted RBP12.17□□□□□ -0.46
RNF220-217ENST00000496262 C12orf76Q8N812 135 aaPredicted RBP12.17□□□□□ -0.46
RNF220-217ENST00000496262 MRPL43Q8N983 215 aaKnown RBP12.17□□□□□ -0.46
RNF220-217ENST00000496262 NECAB1Q8N987 351 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 BCL7CQ8WUZ0 217 aaPredicted RBP12.17□□□□□ -0.46
RNF220-217ENST00000496262 HAS1Q92839 578 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 CASP10Q92851 521 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 DYDC2Q96IM9 177 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 IFT122Q9HBG6 1241 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 RGL1Q9NZL6 768 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 ORC3Q9UBD5 711 aaPredicted RBP12.17□□□□□ -0.46
RNF220-217ENST00000496262 DNAJB4Q9UDY4 337 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 PCDHB2Q9Y5E7 798 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 WDR81Q562E7 1941 aa12.17□□□□□ -0.46
RNF220-217ENST00000496262 ZBTB39O15060 712 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 DKC1O60832 514 aaKnown RBP eCLIP12.16□□□□□ -0.46
RNF220-217ENST00000496262 CLASP2O75122 1294 aaKnown RBP12.16□□□□□ -0.46
RNF220-217ENST00000496262 CTDNEP1O95476 244 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 SSBP05455 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
RNF220-217ENST00000496262 SKIP12755 728 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 GCFC2P16383 781 aaKnown RBP12.16□□□□□ -0.46
RNF220-217ENST00000496262 HOXB8P17481 243 aaPredicted RBP12.16□□□□□ -0.46
RNF220-217ENST00000496262 AK2P54819 239 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 ZNF445P59923 1031 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 NHLH1Q02575 133 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 LAMTOR4Q0VGL1 99 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
RNF220-217ENST00000496262 RARS2Q5T160 578 aaKnown RBP12.16□□□□□ -0.46
RNF220-217ENST00000496262 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 KANK3Q6NY19 840 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 TPH2Q8IWU9 490 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 SUGP1Q8IWZ8 645 aaKnown RBP12.16□□□□□ -0.46
RNF220-217ENST00000496262 URGCPQ8TCY9 931 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 PSPC1Q8WXF1 523 aaKnown RBP12.16□□□□□ -0.46
RNF220-217ENST00000496262 IGSF21Q96ID5 467 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 ZBP1Q9H171 429 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 NRDE2Q9H7Z3 1164 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 MINDY3Q9H8M7 445 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 AGPAT5Q9NUQ2 364 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 MUC6Q6W4X9 2439 aa12.16□□□□□ -0.46
RNF220-217ENST00000496262 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 RRP9O43818 475 aaKnown RBP12.15□□□□□ -0.46
RNF220-217ENST00000496262 ST18O60284 1047 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 B4GALT3O60512 393 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 OFD1O75665 1012 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 LARGE1O95461 756 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 POMCP01189 267 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 EPCAMP16422 314 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 KRT2P35908 639 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 RFC5P40937 340 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 SLC11A1P49279 550 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 AFF1P51825 1210 aaKnown RBP12.15□□□□□ -0.46
RNF220-217ENST00000496262 EPHA7Q15375 998 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 CES5AQ6NT32 575 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 ZNF280BQ86YH2 543 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 WASF1Q92558 559 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 PGBD4Q96DM1 585 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 CCDC43Q96MW1 224 aaKnown RBP12.15□□□□□ -0.46
RNF220-217ENST00000496262 FAM193BQ96PV7 902 aaPredicted RBP12.15□□□□□ -0.46
RNF220-217ENST00000496262 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
RNF220-217ENST00000496262 TRAIPQ9BWF2 469 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 POMKQ9H5K3 350 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 DHX33Q9H6R0 707 aaKnown RBP12.15□□□□□ -0.46
RNF220-217ENST00000496262 BRMS1Q9HCU9 246 aa12.15□□□□□ -0.46
RNF220-217ENST00000496262 TBX3O15119 743 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 ERLIN2O94905 339 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 GALTP07902 379 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 FDPSP14324 419 aaKnown RBP12.14□□□□□ -0.47
RNF220-217ENST00000496262 SIGLEC14Q08ET2 396 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 PTPN21Q16825 1174 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 IER5LQ5T953 404 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 MCTP1Q6DN14 999 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 AGMOQ6ZNB7 445 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 OTUD6AQ7L8S5 288 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 SRGAP1Q7Z6B7 1085 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 DDX53Q86TM3 631 aaKnown RBP12.14□□□□□ -0.47
RNF220-217ENST00000496262 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 C4orf19Q8IY42 314 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 SLFN12Q8IYM2 578 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 MTRQ99707 1265 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 APOL6Q9BWW8 343 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 VN1R3Q9BXE9 311 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 ADAM7Q9H2U9 754 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 ZSWIM4Q9H7M6 989 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 RSAD1Q9HA92 442 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 NR2E1Q9Y466 385 aa12.14□□□□□ -0.47
RNF220-217ENST00000496262 A0A087WWV3 80 aa12.13□□□□□ -0.47
RNF220-217ENST00000496262 C2CD4DB7Z1M9 353 aa12.13□□□□□ -0.47
RNF220-217ENST00000496262 C2CD2LO14523 706 aa12.13□□□□□ -0.47
RNF220-217ENST00000496262 ZNF623O75123 536 aa12.13□□□□□ -0.47
RNF220-217ENST00000496262 DDHD2O94830 711 aa12.13□□□□□ -0.47
RNF220-217ENST00000496262 CTSAP10619 480 aa12.13□□□□□ -0.47
RNF220-217ENST00000496262 HOXA11P31270 313 aaPredicted RBP12.13□□□□□ -0.47
RNF220-217ENST00000496262 ITIH3Q06033 890 aa12.13□□□□□ -0.47
RNF220-217ENST00000496262 SPIRE1Q08AE8 756 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms