RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 DHRS1Q96LJ7 313 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 SETDB2Q96T68 719 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 CHP1Q99653 195 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 SELENOSQ9BQE4 189 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TSEN34Q9BSV6 310 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 TCHPQ9BT92 498 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MTA3Q9BTC8 594 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TMEM109Q9BVC6 243 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TLR10Q9BXR5 811 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 LRRC2Q9BYS8 371 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 IFIH1Q9BYX4 1025 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 TXLNGYQ9BZA5 131 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 PDGFDQ9GZP0 370 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 LACRTQ9GZZ8 138 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DPH5Q9H2P9 285 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DHX36Q9H2U1 1008 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 SLITRK6Q9H5Y7 841 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TLE6Q9H808 572 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DCLRE1BQ9H816 532 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 NHEJ1Q9H9Q4 299 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 NCOA5Q9HCD5 579 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 EPB41L5Q9HCM4 733 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 POLD4Q9HCU8 107 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TIMMDC1Q9NPL8 285 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 FAIMQ9NVQ4 179 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 RHBDL2Q9NX52 303 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DDX43Q9NXZ2 648 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 STK32BQ9NY57 414 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TAB2Q9NYJ8 693 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 KIAA1522Q9P206 1035 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 LRWD1Q9UFC0 647 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 ABCF2Q9UG63 623 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TMEM59LQ9UK28 342 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 FBXL5Q9UKA1 691 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 CROTQ9UKG9 612 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 NOVA2Q9UNW9 492 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 SSX2IPQ9Y2D8 614 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 ARL2BPQ9Y2Y0 163 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 NR2E3Q9Y5X4 410 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 COL1A1P02452 1464 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 COL18A1P39060 1754 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 FNDC1Q4ZHG4 1894 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 DOCK5Q9H7D0 1870 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MAST3O60307 1309 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 XDHP47989 1333 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 MYPNQ86TC9 1320 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 ADGRA3Q8IWK6 1321 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 PASKQ96RG2 1323 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 C10orf71Q711Q0 1435 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 GREB1LQ9C091 1923 aaPredicted RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 GBF1Q92538 1859 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 SSU72P8A0A1W2PR75 194 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 ESYT3A0FGR9 886 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 ZSCAN5CA6NGD5 496 aaPredicted RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 CCDC169A6NNP5 214 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 BTNL10A8MVZ5 291 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 RBAK-RBAKDNI3L0D1 243 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 RNF225M0QZC1 329 aaPredicted RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 TRAFD1O14545 582 aaPredicted RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 CPLX1O14810 134 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 ZNF263O14978 683 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 POLR2DO15514 142 aaKnown RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 FOXO3O43524 673 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 MAN1A2O60476 641 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 RANBP6O60518 1105 aaKnown RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 PFDN1O60925 122 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 ATP9AO75110 1047 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 KRT38O76015 456 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 ZBTB7AO95365 584 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 MOCS3O95396 460 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 BMP15O95972 392 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 AFPP02771 609 aaKnown RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 HNRNPCP07910 306 aaKnown RBP eCLIP2.93□□□□□ -1.94
MDC1-208ENST00000494654 LYNP07948 512 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 THBS1P07996 1170 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 VAV1P15498 845 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 ATP5DP30049 168 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 HOXD12P35452 270 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 SOX11P35716 441 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 SCNN1AP37088 669 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 PPP1R2P41236 205 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 GUCY2FP51841 1108 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 NEK2P51955 445 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 POLGP54098 1239 aaPredicted RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 GDF10P55107 478 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 MTTPP55157 894 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 GEMIN4P57678 1058 aaKnown RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 GTF2IP78347 998 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 CENPCQ03188 943 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 PTSQ03393 145 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 UBXN1Q04323 297 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 TMEM62Q0P6H9 643 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 NFX1Q12986 1120 aaKnown RBP2.93□□□□□ -1.94
MDC1-208ENST00000494654 CLN3Q13286 438 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 TRIM29Q14134 588 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 SCARF1Q14162 830 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 HLTFQ14527 1009 aaKnown RBP eCLIP2.93□□□□□ -1.94
MDC1-208ENST00000494654 MTFR1Q15390 333 aa2.93□□□□□ -1.94
MDC1-208ENST00000494654 SPA17Q15506 151 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms