RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 PROSER3Q2NL68 480 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 IQCEQ6IPM2 695 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 CEP68Q76N32 757 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 LDLRAD3Q86YD5 345 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 CRACR2BQ8N4Y2 399 aaPredicted RBP5.64□□□□□ -1.51
CLIP4-212ENST00000493551 SUPT20HQ8NEM7 779 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 NAF1Q96HR8 494 aaKnown RBP5.64□□□□□ -1.51
CLIP4-212ENST00000493551 SAGE1Q9NXZ1 904 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 PPT2Q9UMR5 302 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 FZD1Q9UP38 647 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 COA3Q9Y2R0 106 aaPredicted RBP5.64□□□□□ -1.51
CLIP4-212ENST00000493551 PCDHB4Q9Y5E5 795 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 TAF1P21675 1872 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 COL4A1P02462 1669 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 PDE4DIPQ5VU43 2346 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 TCRBV5S2A0A599 114 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 ECE2O60344 883 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 CHGBP05060 677 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 ADH4P08319 380 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 GPSM2P81274 684 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 DPY19L2P1Q6NXN4 242 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 TMC5Q6UXY8 1006 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 DDX46Q7L014 1031 aaKnown RBP5.63□□□□□ -1.51
CLIP4-212ENST00000493551 PPP1R42Q7Z4L9 355 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 TAX1BP1Q86VP1 789 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 C1orf210Q8IVY1 113 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 VOPP1Q96AW1 172 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 AJUBAQ96IF1 538 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 UTP14AQ9BVJ6 771 aaKnown RBP5.63□□□□□ -1.51
CLIP4-212ENST00000493551 DLL4Q9NR61 685 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 PGAP2Q9UHJ9 254 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 AKT3Q9Y243 479 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 KIF7Q2M1P5 1343 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 RTL9Q8NET4 1388 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 DUOX1Q9NRD9 1551 aa5.63□□□□□ -1.51
CLIP4-212ENST00000493551 NUP98P52948 1817 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 EN2P19622 333 aaPredicted RBP5.62□□□□□ -1.51
CLIP4-212ENST00000493551 LMO1P25800 156 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 FXR1P51114 621 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLIP4-212ENST00000493551 ATXN1P54253 815 aaKnown RBP5.62□□□□□ -1.51
CLIP4-212ENST00000493551 TAF7Q15545 349 aaPredicted RBP5.62□□□□□ -1.51
CLIP4-212ENST00000493551 FBXO46Q6PJ61 603 aaPredicted RBP5.62□□□□□ -1.51
CLIP4-212ENST00000493551 POMZP3Q6PJE2 187 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 NLRP10Q86W26 655 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 ZNF34Q8IZ26 560 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 FUKQ8N0W3 1084 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 CELF1Q92879 486 aaKnown RBP5.62□□□□□ -1.51
CLIP4-212ENST00000493551 TMEM169Q96HH4 297 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 MXD3Q9BW11 206 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 HSPBP1Q9NZL4 362 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 TRMT112Q9UI30 125 aaKnown RBP5.62□□□□□ -1.51
CLIP4-212ENST00000493551 TMEFF2Q9UIK5 374 aaPredicted RBP5.62□□□□□ -1.51
CLIP4-212ENST00000493551 PCDHB10Q9UN67 800 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 TRIM17Q9Y577 477 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 LAMB4A4D0S4 1761 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 AKAP11Q9UKA4 1901 aa5.62□□□□□ -1.51
CLIP4-212ENST00000493551 ERVV-1B6SEH8 477 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 MYO1BO43795 1136 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 KCNH1O95259 989 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 C1SP09871 688 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 ACO1P21399 889 aaKnown RBP5.61□□□□□ -1.51
CLIP4-212ENST00000493551 CSF2RBP32927 897 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 LAMB2P55268 1798 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 GRAPQ13588 217 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 SMAD2Q15796 467 aaKnown RBP5.61□□□□□ -1.51
CLIP4-212ENST00000493551 EMC4Q5J8M3 183 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 LRCH2Q5VUJ6 765 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 STEAP3Q658P3 488 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 MRGPRGQ86SM5 289 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 SCUBE1Q8IWY4 988 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 REXO1L1PQ8IX06 675 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 GRAPLQ8TC17 118 aaPredicted RBP5.61□□□□□ -1.51
CLIP4-212ENST00000493551 CACTINQ8WUQ7 758 aaKnown RBP5.61□□□□□ -1.51
CLIP4-212ENST00000493551 KLHL6Q8WZ60 621 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 GCC1Q96CN9 775 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 NEIL1Q96FI4 390 aaPredicted RBP5.61□□□□□ -1.51
CLIP4-212ENST00000493551 CFAP53Q96M91 514 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 PLEKHG4BQ96PX9 1271 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 RTFDC1Q9BY42 306 aaPredicted RBP5.61□□□□□ -1.51
CLIP4-212ENST00000493551 CDHR2Q9BYE9 1310 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 POLLQ9UGP5 575 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 EMC9Q9Y3B6 208 aa5.61□□□□□ -1.51
CLIP4-212ENST00000493551 POLR2AP24928 1970 aaKnown RBP5.6□□□□□ -1.51
CLIP4-212ENST00000493551 IBTKQ9P2D0 1353 aaPredicted RBP5.6□□□□□ -1.51
CLIP4-212ENST00000493551 TADA3O75528 432 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 BBOX1O75936 387 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 UFL1O94874 794 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 BCL6P41182 706 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 EIF4A1P60842 406 aaKnown RBP5.6□□□□□ -1.51
CLIP4-212ENST00000493551 KRT24Q2M2I5 525 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 ZNF568Q3ZCX4 644 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 E4F1Q66K89 784 aaPredicted RBP5.6□□□□□ -1.51
CLIP4-212ENST00000493551 COPS6Q7L5N1 327 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 GPR155Q7Z3F1 870 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 ZNF513Q8N8E2 541 aaPredicted RBP5.6□□□□□ -1.51
CLIP4-212ENST00000493551 C19orf47Q8N9M1 422 aaKnown RBP5.6□□□□□ -1.51
CLIP4-212ENST00000493551 NPLOC4Q8TAT6 608 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 CD99L2Q8TCZ2 262 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 FAM89AQ96GI7 184 aa5.6□□□□□ -1.51
CLIP4-212ENST00000493551 SH3TC1Q8TE82 1336 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms