RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 POLR3FQ9H1D9 316 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 PRMT7Q9NVM4 692 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 FAN1Q9Y2M0 1017 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 FSCN2O14926 492 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 ZBTB39O15060 712 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 OFD1O75665 1012 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 NCLP19338 710 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 GTF2F1P35269 517 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 ARL2P36404 184 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 CCT6AP40227 531 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 KRT79Q5XKE5 535 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 MRPL10Q7Z7H8 261 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 ADGRD2Q7Z7M1 963 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 PPFIBP1Q86W92 1011 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 IFNLR1Q8IU57 520 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 MRPL43Q8N983 215 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 LPPQ93052 612 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 PRIMPOLQ96LW4 560 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 TMEM175Q9BSA9 504 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 EMILIN2Q9BXX0 1053 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 CSRNP2Q9H175 543 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 TMEM60Q9H2L4 133 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 RNF19AQ9NV58 838 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 TBC1D13Q9NVG8 400 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 DPP7Q9UHL4 492 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 HCN4Q9Y3Q4 1203 aa18.36■□□□□ 0.53
PDLIM2-217ENST00000491330 PI4K2BG5E9Z4 385 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 LINC01565O15544 149 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 TBX10O75333 385 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 EYA4O95677 639 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 ATF7P17544 494 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 COL9A1P20849 921 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 RILPL1Q5EBL4 403 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 SLC27A1Q6PCB7 646 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 DTHD1Q6ZMT9 781 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 MAEAQ7L5Y9 396 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 DDX53Q86TM3 631 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 VPS52Q8N1B4 723 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 DEPTORQ8TB45 409 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 ADPGKQ9BRR6 497 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 HCSTQ9UBK5 93 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 KCNG1Q9UIX4 513 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 UNC80Q8N2C7 3258 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 NLRC5Q86WI3 1866 aa18.35■□□□□ 0.53
PDLIM2-217ENST00000491330 CHD7Q9P2D1 2997 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 NT5C1B-RDH14C9J2C7 533 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 DCXO43602 365 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 U2AF2P26368 475 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 PBX3P40426 434 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 ZP2Q05996 745 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 DLX2Q07687 328 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 CAPSQ13938 189 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 PADI6Q6TGC4 694 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 SMRP1Q8NCR6 262 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 IGSF21Q96ID5 467 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 MSLNLQ96KJ4 702 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 RPS6KC1Q96S38 1066 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 BACH2Q9BYV9 841 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 MINDY3Q9H8M7 445 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 BARX2Q9UMQ3 279 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 DNM3Q9UQ16 869 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 SMC3Q9UQE7 1217 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 GIT1Q9Y2X7 761 aa18.34■□□□□ 0.53
PDLIM2-217ENST00000491330 PHLPP2Q6ZVD8 1323 aa18.33■□□□□ 0.53
PDLIM2-217ENST00000491330 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 TSPAN1O60635 241 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 GPR37L1O60883 481 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 GALTP07902 379 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 SPATA31C1P0DKV0 1188 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 CYP11B2P19099 503 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 HOXA11P31270 313 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 MAPK6Q16659 721 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 KIAA1841Q6NSI8 718 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 LLGL2Q6P1M3 1020 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 TMEM184AQ6ZMB5 413 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 SNX29Q8TEQ0 813 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 KIFAP3Q92845 792 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 TMX3Q96JJ7 454 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 COLEC11Q9BWP8 271 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 PHF7Q9BWX1 381 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 EPHX3Q9H6B9 360 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 NRDE2Q9H7Z3 1164 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 DZANK1Q9NVP4 752 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 CLEC1BQ9P126 229 aa18.33■□□□□ 0.52
PDLIM2-217ENST00000491330 N4BP3O15049 544 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 MED24O75448 989 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 GLRA2P23416 452 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 PRPHP41219 470 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 OR1G1P47890 313 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 EFNA5P52803 228 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 MBTD1Q05BQ5 628 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 ITIH3Q06033 890 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 PTGDRQ13258 359 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 ANKRD54Q6NXT1 300 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 AGMOQ6ZNB7 445 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 KCTD17Q8N5Z5 321 aa18.32■□□□□ 0.52
PDLIM2-217ENST00000491330 ASAP3Q8TDY4 903 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms