RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 SCOCQ9UIL1 159 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 FOXN3O00409 490 aaPredicted RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 OPHN1O60890 802 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 PHF2O75151 1096 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 PTENP60484 403 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 SP4Q02446 784 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 AUHQ13825 339 aaKnown RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 DHX34Q14147 1143 aaKnown RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 COG2Q14746 738 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 ZYXQ15942 572 aaKnown RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 DDB1Q16531 1140 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 LRRC36Q1X8D7 754 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 CFAP157Q5JU67 520 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 TPTE2Q6XPS3 522 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 ANKRD35Q8N283 1001 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 HIPK4Q8NE63 616 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 NPHS2Q9NP85 383 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 KLHL11Q9NVR0 708 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 SLAIN2Q9P270 581 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 ATRNO75882 1429 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 EPHB2P29323 1055 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 SEPT2Q15019 361 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 PRUNE1Q86TP1 453 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 EXOC3L1Q86VI1 746 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 ZNF384Q8TF68 577 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 SMC6Q96SB8 1091 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 NUP85Q9BW27 656 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 ANO3Q9BYT9 981 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 IQCGQ9H095 443 aaKnown RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 INTS2Q9H0H0 1204 aaKnown RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 GANQ9H2C0 597 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 PAPOLBQ9NRJ5 636 aaKnown RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 SYNGAP1Q96PV0 1343 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 ARHGEF35A5YM69 484 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 RIPK2O43353 540 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 ENTPD5O75356 428 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 GSTA1P08263 222 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 ZCCHC18P0CG32 403 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 CHRM1P11229 460 aaPredicted RBP10.52□□□□□ -0.72
ERCC3-208ENST00000491292 MAPK4P31152 587 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 GTF2IP78347 998 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 PDIA5Q14554 519 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 LACTB2Q53H82 288 aaPredicted RBP10.52□□□□□ -0.72
ERCC3-208ENST00000491292 C6orf163Q5TEZ5 329 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 RMDN2Q96LZ7 410 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 ZNF570Q96NI8 536 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 UBN1Q9NPG3 1134 aa10.52□□□□□ -0.72
ERCC3-208ENST00000491292 NFAT5O94916 1531 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 TCRBV7S2A1N4TA0A589 114 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 K7ENM7 598 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 AKR1B1P15121 316 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 RFC5P40937 340 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 RWDD2BP57060 319 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 GPC5P78333 572 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 CCDC62Q6P9F0 684 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 COL23A1Q86Y22 540 aaPredicted RBP10.52□□□□□ -0.73
ERCC3-208ENST00000491292 PALB2Q86YC2 1186 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 FITM2Q8N6M3 262 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 DNAJC9Q8WXX5 260 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 DNAJC19Q96DA6 116 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 TTC1Q99614 292 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 RUSC1Q9BVN2 902 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 SPZ1Q9BXG8 430 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 ZFP69BQ9UJL9 534 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 AJAP1Q9UKB5 411 aaPredicted RBP10.52□□□□□ -0.73
ERCC3-208ENST00000491292 IGSF9BQ9UPX0 1349 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 KIAA0391O15091 583 aaKnown RBP10.52□□□□□ -0.73
ERCC3-208ENST00000491292 PPFIA2O75334 1257 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 RARAP10276 462 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 ITGA8P53708 1063 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 KLC1Q07866 573 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 GRIK5Q16478 980 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 SYCP2LQ5T4T6 812 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 FRMD5Q7Z6J6 570 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 CPNE8Q86YQ8 564 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 ZNF564Q8TBZ8 553 aaPredicted RBP10.52□□□□□ -0.73
ERCC3-208ENST00000491292 SLCO1B3Q9NPD5 702 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 ANAPC7Q9UJX3 599 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 SUGT1Q9Y2Z0 365 aa10.52□□□□□ -0.73
ERCC3-208ENST00000491292 CYP26A1O43174 497 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 TROVE2P10155 538 aaKnown RBP eCLIP10.51□□□□□ -0.73
ERCC3-208ENST00000491292 PYGMP11217 842 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 PLS3P13797 630 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 BRD2P25440 801 aaKnown RBP10.51□□□□□ -0.73
ERCC3-208ENST00000491292 ECHS1P30084 290 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 FXR2P51116 673 aaKnown RBP eCLIP10.51□□□□□ -0.73
ERCC3-208ENST00000491292 ISLR2Q6UXK2 745 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 PPP1R14CQ8TAE6 165 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 TTC8Q8TAM2 541 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 LNX1Q8TBB1 728 aaPredicted RBP10.51□□□□□ -0.73
ERCC3-208ENST00000491292 SPOCK2Q92563 424 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 CARD9Q9H257 536 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 ANKRD63C9JTQ0 380 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 ZBTB39O15060 712 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 GNPATO15228 680 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 CALCAP01258 141 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 COILP38432 576 aaPredicted RBP10.51□□□□□ -0.73
ERCC3-208ENST00000491292 MMP13P45452 471 aa10.51□□□□□ -0.73
ERCC3-208ENST00000491292 CACNB3P54284 484 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms