RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 MARK2Q7KZI7 788 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 TAOK1Q7L7X3 1001 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 TMEM110Q86TL2 294 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ZNF598Q86UK7 904 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 DDX42Q86XP3 938 aaKnown RBP eCLIP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 MAP7D3Q8IWC1 876 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ALDH16A1Q8IZ83 802 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ADSSL1Q8N142 457 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 STAG2Q8N3U4 1231 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ANKLE1Q8NAG6 615 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SUPT20HQ8NEM7 779 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ACTRT1Q8TDG2 376 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 MTMR8Q96EF0 704 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ABHD8Q96I13 439 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SNX27Q96L92 541 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 AGBL1Q96MI9 1066 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 DUSP9Q99956 384 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 C1QTNF2Q9BXJ5 285 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 MTFR1LQ9H019 292 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ASCC2Q9H1I8 757 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 NEUROG2Q9H2A3 272 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 METTL14Q9HCE5 456 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 TMPRSS4Q9NRS4 437 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ETNK2Q9NVF9 386 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 FGFR1OP2Q9NVK5 253 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 NLRP2Q9NX02 1062 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 VPS54Q9P1Q0 977 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ARHGAP20Q9P2F6 1191 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SUCLA2Q9P2R7 463 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ABCF2Q9UG63 623 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 PARP2Q9UGN5 583 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SALL4Q9UJQ4 1053 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 DBNLQ9UJU6 430 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 CROTQ9UKG9 612 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 PCDHB6Q9Y5E3 794 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 CD2APQ9Y5K6 639 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 PNPLA7Q6ZV29 1317 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 CPDO75976 1380 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 A0A0G2JLW4 131 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SSU72P8A0A1W2PR75 194 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 POTECB2RU33 542 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 BTBD18B2RXH4 712 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 IPO5O00410 1097 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 P4HA2O15460 535 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 RNF113AO15541 343 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TREHO43280 583 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DAPK3O43293 454 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 FZD6O60353 706 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 RANBP6O60518 1105 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 COBLO75128 1261 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PALMO75781 387 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 KRT38O76015 456 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 IGHA2P01877 340 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PLEKP08567 350 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PORP16435 677 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 MARK3P27448 753 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 CASP1P29466 404 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PRCPP42785 496 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 EIF1AXP47813 144 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ANTXR2P58335 489 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 IFI35P80217 286 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 GSTM4Q03013 218 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SF3A3Q12874 501 aaKnown RBP eCLIP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 GIT2Q14161 759 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 R3HDM1Q15032 1099 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 RPS6KA1Q15418 735 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 NTRK3Q16288 839 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DDB1Q16531 1140 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ASTE1Q2TB18 679 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TNNI3KQ59H18 835 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 CFAP157Q5JU67 520 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC174Q6PII3 467 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 KSR2Q6VAB6 950 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 RALYLQ86SE5 291 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ZC3H18Q86VM9 953 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SPATA24Q86W54 205 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 VSIG1Q86XK7 387 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ANKLE2Q86XL3 938 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 NT5DC4Q86YG4 428 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 C2CD5Q86YS7 1000 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 NELFCDQ8IXH7 590 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 IQCF2Q8IXL9 164 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DIS3L2Q8IYB7 885 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ST13P4Q8IZP2 240 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 USHBP1Q8N6Y0 703 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TTC8Q8TAM2 541 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DQX1Q8TE96 717 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SNRNP27Q8WVK2 155 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 CKAP2Q8WWK9 683 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DGCR14Q96DF8 476 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 KAZALD1Q96I82 304 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SUCLG2Q96I99 432 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 EPSTI1Q96J88 318 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 NEUROD6Q96NK8 337 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 NLRP3Q96P20 1036 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 KCTD15Q96SI1 283 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SIKE1Q9BRV8 207 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TUBGCP2Q9BSJ2 902 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TCHPQ9BT92 498 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms