RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RGS18Q9NS28 235 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 SEL1LQ9UBV2 794 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 HOOK1Q9UJC3 728 aaKnown RBP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 RBAK-RBAKDNI3L0D1 243 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 STAG3L1P0CL83 205 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 SKIP12755 728 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 SCP2P22307 547 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 ABCD1P33897 745 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 ZNF131P52739 623 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 NOTUMQ6P988 496 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 CLEC17AQ6ZS10 378 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 SLC24A5Q71RS6 500 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 HAUS6Q7Z4H7 955 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 SFR1Q86XK3 245 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 GRAMD1CQ8IYS0 662 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 FZD8Q9H461 694 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 TMEM134Q9H6X4 195 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 AGPAT5Q9NUQ2 364 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 PCDHB7Q9Y5E2 793 aa17.32■□□□□ 0.36
C9orf3-219ENST00000488186 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-219ENST00000488186 ACKR2O00590 384 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 MGEA5O60502 916 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 TSPAN1O60635 241 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 KINO60870 393 aaKnown RBP17.31■□□□□ 0.36
C9orf3-219ENST00000488186 MYL1P05976 194 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 FAM187BQ17R55 369 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 FAM117BQ6P1L5 589 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 RTN4RL1Q86UN2 441 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-219ENST00000488186 FMR1NBQ8N0W7 255 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-219ENST00000488186 TMEM161BQ8NDZ6 487 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 BICD1Q96G01 975 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 CPB2Q96IY4 423 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 TRIM6Q9C030 488 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-219ENST00000488186 TBC1D7Q9P0N9 293 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 ARHGAP28Q9P2N2 729 aa17.31■□□□□ 0.36
C9orf3-219ENST00000488186 TTC3P53804 2025 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 ADGRA3Q8IWK6 1321 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 SOX1O00570 391 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-219ENST00000488186 N4BP3O15049 544 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 GTPBP6O43824 516 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-219ENST00000488186 CASP1P29466 404 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 NMT1P30419 496 aaKnown RBP17.3■□□□□ 0.36
C9orf3-219ENST00000488186 SARSP49591 514 aaKnown RBP17.3■□□□□ 0.36
C9orf3-219ENST00000488186 NCKAP1LP55160 1127 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 DEFB103AP81534 67 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 CUL4BQ13620 913 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 DSC3Q14574 896 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 STXBP4Q6ZWJ1 553 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 APBB1IPQ7Z5R6 666 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-219ENST00000488186 RNF169Q8NCN4 708 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 CCDC51Q96ER9 411 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 ADPGKQ9BRR6 497 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 TCHPQ9BT92 498 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 MRPL4Q9BYD3 311 aaKnown RBP17.3■□□□□ 0.36
C9orf3-219ENST00000488186 MSRAQ9UJ68 235 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
C9orf3-219ENST00000488186 PVALEFA0A1B0GWK0 134 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 B4GALT5O43286 388 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 TLL1O43897 1013 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 NR1I2O75469 434 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 GCNT3O95395 438 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 MAPTP10636 758 aaKnown RBP17.29■□□□□ 0.36
C9orf3-219ENST00000488186 ARF4P18085 180 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-219ENST00000488186 HOXA11P31270 313 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-219ENST00000488186 MATR3P43243 847 aaKnown RBP eCLIP17.29■□□□□ 0.36
C9orf3-219ENST00000488186 RAB27AP51159 221 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 COASYQ13057 564 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 SNW1Q13573 536 aaKnown RBP17.29■□□□□ 0.36
C9orf3-219ENST00000488186 RAB30Q15771 203 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 SLC27A1Q6PCB7 646 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 UNC13DQ70J99 1090 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 HERC6Q8IVU3 1022 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 HACE1Q8IYU2 909 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 ENGASEQ8NFI3 743 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 LINC01599Q8WXQ3 324 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 TOP1MTQ969P6 601 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 TIGD1Q96MW7 591 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 CCDC113Q9H0I3 377 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 EXOC1Q9NV70 894 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 MYH11P35749 1972 aa17.29■□□□□ 0.36
C9orf3-219ENST00000488186 CNTNAP2Q9UHC6 1331 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 PTPRSQ13332 1948 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 A0A0U1RQF3 1178 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 C9IYK1 514 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 AMHR2Q16671 573 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 ATF7IP2Q5U623 682 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 ZNF720Q7Z2F6 126 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 NPAS4Q8IUM7 802 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 PGBD4Q96DM1 585 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 YME1L1Q96TA2 773 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 OLFML3Q9NRN5 406 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 FAM105AQ9NUU6 356 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 TBX20Q9UMR3 447 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 PCDHA11Q9Y5I1 949 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
C9orf3-219ENST00000488186 GBF1Q92538 1859 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 A0A1B0GUA9 196 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms