RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 KCNH7Q9NS40 1196 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
SND1-213ENST00000486037 INPP5FQ9Y2H2 1132 aa11.1□□□□□ -0.63
SND1-213ENST00000486037 GCN1Q92616 2671 aaKnown RBP11.1□□□□□ -0.63
SND1-213ENST00000486037 AKAP13Q12802 2813 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 DDX39AO00148 427 aaKnown RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 TM4SF5O14894 197 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 TEX28O15482 410 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 LARGE1O95461 756 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 AFF1P51825 1210 aaKnown RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 ANTXR2P58335 489 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 NLRP11P59045 1033 aaKnown RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 MTAPQ13126 283 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 SRSF5Q13243 272 aaKnown RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 TOB2Q14106 344 aaPredicted RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 LAIR1Q6GTX8 287 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 ABHD15Q6UXT9 468 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 Q6ZUG5 572 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 TRMT1LQ7Z2T5 733 aaKnown RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 METTL13Q8N6R0 699 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 LINC01465Q8N7H1 131 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 SPRYD3Q8NCJ5 442 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 NCOA7Q8NI08 942 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 TNPO1Q92973 898 aaKnown RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 CUL5Q93034 780 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 CLDN23Q96B33 292 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 SHDQ96IW2 340 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 TMX3Q96JJ7 454 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 LARP6Q9BRS8 491 aaKnown RBP11.09□□□□□ -0.63
SND1-213ENST00000486037 LRRC2Q9BYS8 371 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 RHOBTB2Q9BYZ6 727 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 RXFP3Q9NSD7 469 aa11.09□□□□□ -0.63
SND1-213ENST00000486037 RALGAPA1Q6GYQ0 2036 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 COL1A2P08123 1366 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 SOBPA7XYQ1 873 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 DDHD2O94830 711 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 PAPLNO95428 1278 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 RETP07949 1114 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 EIF4BP23588 611 aaKnown RBP11.08□□□□□ -0.64
SND1-213ENST00000486037 NTHL1P78549 312 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 PRKCQQ04759 706 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 TROAPQ12815 778 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 TRAF1Q13077 416 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 ZNF484Q5JVG2 852 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 UNQ6494/PRO21346Q6UXR6 183 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 PRR23BQ6ZRT6 265 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 LRRC71Q8N4P6 559 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 MXRA8Q9BRK3 442 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 TMEM121BQ9BXQ6 578 aaPredicted RBP11.08□□□□□ -0.64
SND1-213ENST00000486037 AGXT2Q9BYV1 514 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 OSBPL6Q9BZF3 934 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 NT5C3AQ9H0P0 336 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 FREM2Q5SZK8 3169 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 NFASCO94856 1347 aa11.08□□□□□ -0.64
SND1-213ENST00000486037 F8W810 466 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 BACH1O14867 736 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 PRC1O43663 620 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 OFD1O75665 1012 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 SPINK2P20155 84 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 HOXC13P31276 330 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 MCM5P33992 734 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 PHKA2P46019 1235 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 TRDNQ13061 729 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 CUL4AQ13619 759 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 CSRP2Q16527 193 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 NOMO2Q5JPE7 1267 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 PDXDC2PQ6P474 469 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 RALYLQ86SE5 291 aaKnown RBP11.07□□□□□ -0.64
SND1-213ENST00000486037 PGBD1Q96JS3 809 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 AGO4Q9HCK5 861 aaKnown RBP11.07□□□□□ -0.64
SND1-213ENST00000486037 MRPL17Q9NRX2 175 aaKnown RBP11.07□□□□□ -0.64
SND1-213ENST00000486037 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
SND1-213ENST00000486037 MARCH5Q9NX47 278 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.07□□□□□ -0.645e-7■■■■□ 22.3
SND1-213ENST00000486037 TPCN1Q9ULQ1 816 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 PCDHA6Q9UN73 950 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 LIMCH1Q9UPQ0 1083 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 AKT3Q9Y243 479 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 PCDHA8Q9Y5H6 950 aa11.07□□□□□ -0.64
SND1-213ENST00000486037 FLNBO75369 2602 aaKnown RBP11.07□□□□□ -0.64
SND1-213ENST00000486037 MAFGO15525 162 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 HRO43593 1189 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 GLUD1P00367 558 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 DARSP14868 501 aaKnown RBP11.06□□□□□ -0.64
SND1-213ENST00000486037 MAGEA9P43362 315 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 NT5C2P49902 561 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 SLC26A2P50443 739 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 GPC3P51654 580 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 RING1Q06587 406 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 ST3GAL1Q11201 340 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 ANKRD1Q15327 319 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 ZBTB41Q5SVQ8 909 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 SWSAP1Q6NVH7 229 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 LRSAM1Q6UWE0 723 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 CYP26C1Q6V0L0 522 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 TPRG1Q6ZUI0 275 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 PALB2Q86YC2 1186 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms