RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PDHBP11177 359 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 HOXC8P31273 242 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 RFC2P35250 354 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 MRPL12P52815 198 aaKnown RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 FUT2Q10981 343 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 ARMC4Q5T2S8 1044 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 C6orf15Q6UXA7 325 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 CCBE1Q6UXH8 406 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 SYNPOQ8N3V7 929 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 MYCT1Q8N699 235 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 PHC3Q8NDX5 983 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 OR8H1Q8NGG4 311 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 ESR2Q92731 530 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 MAP4K1Q92918 833 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 TMEM47Q9BQJ4 181 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 RIOX1Q9H6W3 641 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 MAN1C1Q9NR34 630 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 CYP39A1Q9NYL5 469 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 IFT80Q9P2H3 777 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 SUCOQ9UBS9 1254 aaKnown RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 FBXL5Q9UKA1 691 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 SMCHD1A6NHR9 2005 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 A0A1W2PRU2 124 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SOWAHBA6NEL2 793 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 KBTBD13C9JR72 458 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SMIM22K7EJ46 135 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TPPPO94811 219 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 CHGBP05060 677 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 PFKMP08237 780 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 CCT5P48643 541 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SATB1Q01826 763 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 ACVR2BQ13705 512 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 PCBP1Q15365 356 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TBCELQ5QJ74 424 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SYDE2Q5VT97 1194 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 FAAH2Q6GMR7 532 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 ENOSF1Q7L5Y1 443 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 DPP9Q86TI2 863 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TDHQ8IZJ6 230 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 RUFY2Q8WXA3 655 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 EDEM1Q92611 657 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SEC62Q99442 399 aaKnown RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SLC13A1Q9BZW2 595 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 RNF39Q9H2S5 420 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 CDC23Q9UJX2 597 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TBX21Q9UL17 535 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 MAPRE3Q9UPY8 281 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 CRYL1Q9Y2S2 319 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TTLL13PA6NNM8 815 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TISP43B9A030 160 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 B9A039 149 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 RASA4BC9J798 803 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 FOXN3O00409 490 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 ASTN1O14525 1302 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 FBXO24O75426 580 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 RARBP10826 455 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 ATP1A3P13637 1013 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 INF2Q27J81 1249 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SNRNP48Q6IEG0 339 aaKnown RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 PKN3Q6P5Z2 889 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 KCNV1Q6PIU1 500 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 BNC2Q6ZN30 1099 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 EP400NLQ6ZTU2 488 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 DIS3LQ8TF46 1054 aaKnown RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TBATAQ96M53 351 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 LZTS2Q9BRK4 669 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 CHCHD6Q9BRQ6 235 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TSPAN10Q9H1Z9 355 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SUDS3Q9H7L9 328 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 RASSF1Q9NS23 344 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 TBC1D22BQ9NU19 505 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 ADD3Q9UEY8 706 aaKnown RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 RIPK3Q9Y572 518 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 NCAM2O15394 837 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SGSM2O43147 1006 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 DNTTP04053 509 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 XPAP23025 273 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 ICAM3P32942 547 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 CCNFP41002 786 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 RTP1P59025 263 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SEPT7Q16181 437 aaKnown RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 DUSP28Q4G0W2 176 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 BRICD5Q6PL45 260 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 MFSD6Q6ZSS7 791 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 ZNF589Q86UQ0 364 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SLFN12Q8IYM2 578 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 RADILQ96JH8 1075 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 A1CFQ9NQ94 594 aaKnown RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 FBXO28Q9NVF7 368 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 PDP2Q9P2J9 529 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 NFKBIL1Q9UBC1 381 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 SUN2Q9UH99 717 aa5.88□□□□□ -1.47
CCDC39-205ENST00000485055 EIF2B4Q9UI10 523 aaKnown RBP5.88□□□□□ -1.47
CCDC39-205ENST00000485055 WDR81Q562E7 1941 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 A0A1B0GVC2 190 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 RRN3P2A6NIE6 340 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 TLR5O60602 858 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 MUTP22033 750 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms