RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 EML5Q05BV3 1969 aa13.96□□□□□ -0.18
HDAC8-217ENST00000478743 COL1A2P08123 1366 aa13.96□□□□□ -0.18
HDAC8-217ENST00000478743 DDX39AO00148 427 aaKnown RBP13.95□□□□□ -0.18
HDAC8-217ENST00000478743 OFD1O75665 1012 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 SOD2P04179 222 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 URODP06132 367 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 ADH1AP07327 375 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 PHKA2P46019 1235 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 NRLP54845 237 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 GRM4Q14833 912 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 HEATR6Q6AI08 1181 aaKnown RBP13.95□□□□□ -0.18
HDAC8-217ENST00000478743 KIAA1211LQ6NV74 962 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 TRMT1LQ7Z2T5 733 aaKnown RBP13.95□□□□□ -0.18
HDAC8-217ENST00000478743 FGF13Q92913 245 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
HDAC8-217ENST00000478743 MYH9P35579 1960 aaKnown RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 SPAG17Q6Q759 2223 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 PIK3CDO00329 1044 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 NRG2O14511 850 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 TGM5O43548 720 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 ATG7O95352 703 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 RNASELQ05823 741 aaKnown RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 PDCD11Q14690 1871 aaKnown RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 MCMDC2Q4G0Z9 681 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 IFIT1BQ5T764 474 aaKnown RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 ZNF852Q6ZMS4 543 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 RNF168Q8IYW5 571 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 C12orf50Q8NA57 414 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 ADAM32Q8TC27 787 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 KCNH7Q9NS40 1196 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 AKT3Q9Y243 479 aa13.94□□□□□ -0.18
HDAC8-217ENST00000478743 PRG3Q9Y2Y8 225 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-217ENST00000478743 K7ESF4 209 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 NRP1O14786 923 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 NCAM2O15394 837 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 EFEMP2O95967 443 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 DARSP14868 501 aaKnown RBP13.93□□□□□ -0.18
HDAC8-217ENST00000478743 RPL17P18621 184 aaKnown RBP13.93□□□□□ -0.18
HDAC8-217ENST00000478743 PFKPQ01813 784 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 ZNF484Q5JVG2 852 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 CYB5R4Q7L1T6 521 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 PDZD3Q86UT5 571 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 ING5Q8WYH8 240 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 TNPO1Q92973 898 aaKnown RBP13.93□□□□□ -0.18
HDAC8-217ENST00000478743 DCTPP1Q9H773 170 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 RXFP1Q9HBX9 757 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 ZDHHC7Q9NXF8 308 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 NAV2Q8IVL1 2488 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 CELSR3Q9NYQ7 3312 aa13.93□□□□□ -0.18
HDAC8-217ENST00000478743 NFASCO94856 1347 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 BACH1O14867 736 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 ZNF806P0C7X5 589 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 GLUD2P49448 558 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 GPC3P51654 580 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 CCR3P51677 355 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 PDXDC2PQ6P474 469 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 LILRA6Q6PI73 481 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 ABHD15Q6UXT9 468 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 MTSS1LQ765P7 747 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 NPAS3Q8IXF0 933 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 HCFC1R1Q9NWW0 138 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 GPSM3Q9Y4H4 160 aa13.92□□□□□ -0.18
HDAC8-217ENST00000478743 F5P12259 2224 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 ZNF213O14771 459 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 ZMYND10O75800 440 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 MX1P20591 662 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 DRP2Q13474 957 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 AGMOQ6ZNB7 445 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 Q6ZS52 159 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 CUL5Q93034 780 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 NELL2Q99435 816 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 LMAN1LQ9HAT1 526 aa13.91□□□□□ -0.18
HDAC8-217ENST00000478743 AGO4Q9HCK5 861 aaKnown RBP13.91□□□□□ -0.18
HDAC8-217ENST00000478743 ZFP37Q9Y6Q3 630 aaPredicted RBP13.91□□□□□ -0.18
HDAC8-217ENST00000478743 TENM4Q6N022 2769 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 HYAL3O43820 417 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-217ENST00000478743 GAS2O43903 313 aaKnown RBP13.9□□□□□ -0.18
HDAC8-217ENST00000478743 FOXD2O60548 495 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-217ENST00000478743 EPN2O95208 641 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 SLC26A2P50443 739 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 GRM2Q14416 872 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 COL28A1Q2UY09 1125 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 SH3PXD2AQ5TCZ1 1133 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 RNF43Q68DV7 783 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 EFCAB12Q6NXP0 572 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 MAMSTRQ6ZN01 415 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 CEP68Q76N32 757 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 LONP2Q86WA8 852 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 MXRA8Q9BRK3 442 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 SDF4Q9BRK5 362 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 UBAC1Q9BSL1 405 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 ZNF302Q9NR11 478 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms