RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 CCDC144BQ3MJ40 725 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 TRIM60Q495X7 471 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PRAMEF19Q5SWL8 479 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 TTC22Q5TAA0 569 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 ERICH6BQ5W0A0 696 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 CCSAPQ6IQ19 270 aaPredicted RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 MFSD5Q6N075 450 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PSRC1Q6PGN9 363 aaPredicted RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 ARMCX2Q7L311 632 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 FAM133AQ8N9E0 248 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 MORC4Q8TE76 937 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 FAM227BQ96M60 508 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 CNNM2Q9H8M5 875 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 RAVER2Q9HCJ3 691 aaKnown RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PRDM5Q9NQX1 630 aaPredicted RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PDLIM7Q9NR12 457 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 ZHX1Q9UKY1 873 aaPredicted RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PCDHA4Q9UN74 947 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PLAGL2Q9UPG8 496 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 RNF114Q9Y508 228 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 SNX11Q9Y5W9 270 aa7.34□□□□□ -1.23
HOXB3-209ENST00000478644 ZNFX1Q9P2E3 1918 aaKnown RBP7.34□□□□□ -1.23
HOXB3-209ENST00000478644 PARP14Q460N5 1801 aa7.34□□□□□ -1.24
HOXB3-209ENST00000478644 FRMPD3Q5JV73 1810 aa7.34□□□□□ -1.24
HOXB3-209ENST00000478644 WDR19Q8NEZ3 1342 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 SYNRGQ9UMZ2 1314 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 ALPK3Q96L96 1907 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 A0A0D9SFI3 127 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 SMIM22K7EJ46 135 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 PARNO95453 639 aaKnown RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 PGK1P00558 417 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 FGAP02671 866 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 CEACAM5P06731 702 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 ASGR1P07306 291 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 HSPD1P10809 573 aaKnown RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 GSPT1P15170 499 aaKnown RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 ERCC5P28715 1186 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 PTPN11Q06124 597 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 NMIQ13287 307 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 AKNAD1Q5T1N1 836 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 NOL8Q76FK4 1167 aaKnown RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 NOP9Q86U38 636 aaKnown RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 MCF2L2Q86YR7 1114 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 CCDC144CPQ8IYA2 1237 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 TOP6BLQ8N6T0 577 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 FAM181AQ8N9Y4 354 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 RUFY2Q8WXA3 655 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 BADQ92934 168 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 GAL3ST3Q96A11 431 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 NUP88Q99567 741 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 KRT23Q9C075 422 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 RANBP17Q9H2T7 1088 aaKnown RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 A1CFQ9NQ94 594 aaKnown RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 TOMM22Q9NS69 142 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 RNF146Q9NTX7 359 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 CYP39A1Q9NYL5 469 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 CCPG1Q9ULG6 757 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 ISY1Q9ULR0 285 aaKnown RBP7.33□□□□□ -1.24
HOXB3-209ENST00000478644 RIPK3Q9Y572 518 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 TRIOBPQ9H2D6 2365 aa7.33□□□□□ -1.24
HOXB3-209ENST00000478644 CCDC171Q6TFL3 1326 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 PQBP1O60828 265 aaKnown RBP7.32□□□□□ -1.24
HOXB3-209ENST00000478644 ALAS1P13196 640 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 RFC2P35250 354 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 INPP5AQ14642 412 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 RAB30Q15771 203 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 IMMTQ16891 758 aaKnown RBP7.32□□□□□ -1.24
HOXB3-209ENST00000478644 TSNAXIP1Q2TAA8 658 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 DUSP28Q4G0W2 176 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 SYDE2Q5VT97 1194 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 KCNV1Q6PIU1 500 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 DPH6Q7L8W6 267 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 UBE3DQ7Z6J8 389 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 ZNF589Q86UQ0 364 aaPredicted RBP7.32□□□□□ -1.24
HOXB3-209ENST00000478644 KRTAP1-3Q8IUG1 177 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 LRRC47Q8N1G4 583 aaKnown RBP7.32□□□□□ -1.24
HOXB3-209ENST00000478644 SLC43A3Q8NBI5 491 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 ZNF507Q8TCN5 953 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 ANKS1AQ92625 1134 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 FERMT2Q96AC1 680 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 RNPC3Q96LT9 517 aaKnown RBP7.32□□□□□ -1.24
HOXB3-209ENST00000478644 IWS1Q96ST2 819 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 IL17RBQ9NRM6 502 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 DIAPH3Q9NSV4 1193 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 TMA7Q9Y2S6 64 aaKnown RBP7.32□□□□□ -1.24
HOXB3-209ENST00000478644 MYH4Q9Y623 1939 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 PLXNA1Q9UIW2 1896 aa7.32□□□□□ -1.24
HOXB3-209ENST00000478644 COL11A1P12107 1806 aaPredicted RBP7.31□□□□□ -1.24
HOXB3-209ENST00000478644 RANBP2P49792 3224 aaKnown RBP7.31□□□□□ -1.24
HOXB3-209ENST00000478644 ZNF536O15090 1300 aa7.31□□□□□ -1.24
HOXB3-209ENST00000478644 TRIM43BA6NCK2 446 aa7.31□□□□□ -1.24
HOXB3-209ENST00000478644 SNHG28P0DPA3 235 aa7.31□□□□□ -1.24
HOXB3-209ENST00000478644 CD8BP10966 210 aa7.31□□□□□ -1.24
HOXB3-209ENST00000478644 FUT4P22083 530 aa7.31□□□□□ -1.24
HOXB3-209ENST00000478644 CHMLP26374 656 aa7.31□□□□□ -1.24
HOXB3-209ENST00000478644 BNIP3Q12983 259 aa7.31□□□□□ -1.24
HOXB3-209ENST00000478644 TRDNQ13061 729 aa7.31□□□□□ -1.24
HOXB3-209ENST00000478644 SHHQ15465 462 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms