RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 KCNA3P22001 575 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 PGM5Q15124 567 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 SWSAP1Q6NVH7 229 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 ARHGAP27Q6ZUM4 889 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 RFFLQ8WZ73 363 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 TMEM117Q9H0C3 514 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 SEL1LQ9UBV2 794 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 FBXL5Q9UKA1 691 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 SNX24Q9Y343 169 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 TLDC2A0PJX2 215 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 PLS3P13797 630 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 GUCY2CP25092 1073 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 HOXA7P31268 230 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-221ENST00000469415 CETN1Q12798 172 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 PIK3R5Q8WYR1 880 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 PBKQ96KB5 322 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 PCDHB18PQ96TA0 734 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 ALG6Q9Y672 507 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 MYH11P35749 1972 aa19.28■□□□□ 0.68
MCF2L-221ENST00000469415 MMEP08473 750 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 BCRP11274 1271 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 SEZ6Q53EL9 994 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 GLE1Q53GS7 698 aaKnown RBP19.27■□□□□ 0.68
MCF2L-221ENST00000469415 C10orf76Q5T2E6 689 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 BSNDQ8WZ55 320 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 POMGNT1Q8WZA1 660 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 HSD17B3P37058 310 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 KCNJ1P48048 391 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 HSD17B4P51659 736 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 SCFD2Q8WU76 684 aa19.27■□□□□ 0.68
MCF2L-221ENST00000469415 PLTPP55058 493 aa19.27■□□□□ 0.67
MCF2L-221ENST00000469415 DHX9Q08211 1270 aaKnown RBP19.27■□□□□ 0.67
MCF2L-221ENST00000469415 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.67
MCF2L-221ENST00000469415 SRLQ86TD4 932 aa19.27■□□□□ 0.67
MCF2L-221ENST00000469415 OLIG1Q8TAK6 271 aa19.27■□□□□ 0.67
MCF2L-221ENST00000469415 TAS1R2Q8TE23 839 aa19.27■□□□□ 0.67
MCF2L-221ENST00000469415 TATDN2Q93075 761 aa19.27■□□□□ 0.67
MCF2L-221ENST00000469415 ZNF668Q96K58 619 aaPredicted RBP19.27■□□□□ 0.67
MCF2L-221ENST00000469415 PDCD2LQ9BRP1 358 aa19.27■□□□□ 0.67
MCF2L-221ENST00000469415 DEFB129Q9H1M3 183 aa19.27■□□□□ 0.67
MCF2L-221ENST00000469415 PPANQ9NQ55 473 aaKnown RBP19.27■□□□□ 0.67
MCF2L-221ENST00000469415 PHF20L1A8MW92 1017 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 SLC26A4O43511 780 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 IVLP07476 585 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 CNGA1P29973 690 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 ADSSP30520 456 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 GJC1P36383 396 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 SNRNP35Q16560 246 aaKnown RBP19.26■□□□□ 0.67
MCF2L-221ENST00000469415 C1orf220Q5T0J3 134 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 ANO5Q75V66 913 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 EEPD1Q7L9B9 569 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 NOP9Q86U38 636 aaKnown RBP19.26■□□□□ 0.67
MCF2L-221ENST00000469415 NLRX1Q86UT6 975 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 MICALL2Q8IY33 904 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 IQCKQ8N0W5 287 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 MSL3Q8N5Y2 521 aaKnown RBP19.26■□□□□ 0.67
MCF2L-221ENST00000469415 LMO3Q8TAP4 145 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 MKNK1Q9BUB5 465 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 GOLGA8KD6RF30 607 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 HNRNPDLO14979 420 aaKnown RBP19.26■□□□□ 0.67
MCF2L-221ENST00000469415 NPTX2P47972 431 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 INTS8Q75QN2 995 aaKnown RBP19.26■□□□□ 0.67
MCF2L-221ENST00000469415 CAVIN3Q969G5 261 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 C18orf8Q96DM3 657 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 FAM213AQ9BRX8 229 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 KMT5AQ9NQR1 393 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 SEPT9Q9UHD8 586 aaPredicted RBP19.26■□□□□ 0.67
MCF2L-221ENST00000469415 QSER1Q2KHR3 1735 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 C10orf71Q711Q0 1435 aa19.26■□□□□ 0.67
MCF2L-221ENST00000469415 TCRBV7S2A1N4TA0A589 114 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 GTPBP10A4D1E9 387 aaKnown RBP19.25■□□□□ 0.67
MCF2L-221ENST00000469415 MTERF2Q49AM1 385 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 B3GNT9Q6UX72 402 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 SYCE1Q8N0S2 351 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 WRNIP1Q96S55 665 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 FAM118BQ9BPY3 351 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 SPOPO43791 374 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 ZBED4O75132 1171 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 PPP1R37O75864 691 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 TMOD1P28289 359 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 ALS2CLQ60I27 953 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 MCF2L2Q86YR7 1114 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 KREMEN1Q96MU8 473 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 SLC38A10Q9HBR0 1119 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 DNAJC17Q9NVM6 304 aaKnown RBP19.25■□□□□ 0.67
MCF2L-221ENST00000469415 HACL1Q9UJ83 578 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 GOLGA6L10A6NI86 522 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 DCDC2CA8MYV0 355 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 NDUFAB1O14561 156 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 NF2P35240 595 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 CCDC25Q86WR0 208 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 ACTRT1Q8TDG2 376 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 CAMKK2Q96RR4 588 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 TRIM7Q9C029 511 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 SUCLA2Q9P2R7 463 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-221ENST00000469415 UBIAD1Q9Y5Z9 338 aa19.25■□□□□ 0.67
MCF2L-221ENST00000469415 TMEM253P0C7T8 217 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 COMTP21964 271 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 SNX1Q13596 522 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms