RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 MAP4K2Q12851 820 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 TSTQ16762 297 aaKnown RBP4.34□□□□□ -1.72
UBR3-206ENST00000444475 MPEG1Q2M385 716 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 PGBD2Q6P3X8 592 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 FDX2Q6P4F2 183 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 NXPE1Q8N323 547 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 ZNF527Q8NB42 609 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 CTCFLQ8NI51 663 aaPredicted RBP4.34□□□□□ -1.72
UBR3-206ENST00000444475 RNF139Q8WU17 664 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 VPS39Q96JC1 886 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 SPATA17Q96L03 361 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 C16orf45Q96MC5 204 aaPredicted RBP4.34□□□□□ -1.72
UBR3-206ENST00000444475 GSX2Q9BZM3 304 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 OCEL1Q9H607 264 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 SENP2Q9HC62 589 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 SERPINB13Q9UIV8 391 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 TMED5Q9Y3A6 229 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 KCNMB2Q9Y691 235 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 ADGRL1O94910 1474 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 SYNJ1O43426 1573 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 RGSL1A5PLK6 1076 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 RIPK2O43353 540 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 MYO1BO43795 1136 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 TBCAO75347 108 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 STAMBPO95630 424 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 GJB1P08034 283 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 RFC4P35249 363 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 CASP6P55212 293 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 FCGRTP55899 365 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ARHGAP8P85298 464 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ACTN3Q08043 901 aaPredicted RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 PIK3R6Q5UE93 754 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ARHGAP11AQ6P4F7 1023 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 PGM2L1Q6PCE3 622 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 IYDQ6PHW0 289 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 B4GALNT4Q76KP1 1039 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 UNC45BQ8IWX7 931 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 GDAP1Q8TB36 358 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 PIGOQ8TEQ8 1089 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 CHTF18Q8WVB6 975 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 LMBR1Q8WVP7 490 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ZNF764Q96H86 408 aaPredicted RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 ZCCHC2Q9C0B9 1178 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 SIL1Q9H173 461 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 MED4Q9NPJ6 270 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 SRP68Q9UHB9 627 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 PCDHB10Q9UN67 800 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 CAB39Q9Y376 341 aaPredicted RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 SMARCA4P51532 1647 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 IQSEC2Q5JU85 1478 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 A0A0G2JPF8 293 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 HNRNPCL3B7ZW38 293 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 DDX39AO00148 427 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 SYT5O00445 386 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 PLSCR1O15162 318 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 RTN3O95197 1032 aaPredicted RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 LARGE1O95461 756 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 QDPRP09417 244 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 HNRNPCL4P0DMR1 293 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 FERP16591 822 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 GPC1P35052 558 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 MSH2P43246 934 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 HSPA7P48741 367 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ETV1P50549 477 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ITGA8P53708 1063 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ADKP55263 362 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 ADCY2Q08462 1091 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 CNN3Q15417 329 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 SMAD2Q15796 467 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 CNGA3Q16281 694 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 CCDC178Q5BJE1 867 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 SLC9C2Q5TAH2 1124 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 METTL11BQ5VVY1 283 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 TRIM74Q86UV6 250 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 TRIM73Q86UV7 250 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ZSCAN1Q8NBB4 408 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 TMEM169Q96HH4 297 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 FNBP1Q96RU3 617 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 TCF12Q99081 682 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 HERC2P3Q9BVR0 1158 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ACAT2Q9BWD1 397 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 CARD11Q9BXL7 1154 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 BCL2L12Q9HB09 334 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 TAS2R3Q9NYW6 316 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 BAZ1BQ9UIG0 1483 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 CDK2AP1O14519 115 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 H2AFYO75367 372 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 MYCP01106 439 aaPredicted RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 DLDP09622 509 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 ZNF24P17028 368 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 MTIF2P46199 727 aaKnown RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 ZNF143P52747 638 aaPredicted RBP4.33□□□□□ -1.72
UBR3-206ENST00000444475 SEC24CP53992 1094 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 VAMP2P63027 116 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 ACY1Q03154 408 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 TRDNQ13061 729 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 PMS2P11Q13670 270 aa4.33□□□□□ -1.72
UBR3-206ENST00000444475 KYNUQ16719 465 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms