RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-211ENST00000430454 SLC39A11Q8N1S5 342 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 MRPL43Q8N983 215 aaKnown RBP10.13□□□□□ -0.79
HDAC9-211ENST00000430454 IFT74Q96LB3 600 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 TMEM175Q9BSA9 504 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 RSAD1Q9HA92 442 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-211ENST00000430454 RNF19AQ9NV58 838 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 WRAP73Q9P2S5 460 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-211ENST00000430454 KCNG1Q9UIX4 513 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 INPP5FQ9Y2H2 1132 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 WDR81Q562E7 1941 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 PHLPP2Q6ZVD8 1323 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 TCF20Q9UGU0 1960 aaKnown RBP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 H3BQV1 296 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 DCXO43602 365 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 OFD1O75665 1012 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 CXCL14O95715 111 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 NCLP19338 710 aaKnown RBP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 ARL2P36404 184 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 ERVFC1P60507 584 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 ZP2Q05996 745 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 C8orf34Q49A92 452 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 TMEM184AQ6ZMB5 413 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 ADGRD2Q7Z7M1 963 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 DDX53Q86TM3 631 aaKnown RBP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 CATSPER3Q86XQ3 398 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 KCTD17Q8N5Z5 321 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 ZNF579Q8NAF0 562 aaKnown RBP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 PRIMPOLQ96LW4 560 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 EMILIN2Q9BXX0 1053 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 POLR3FQ9H1D9 316 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 TBC1D13Q9NVG8 400 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 PRMT7Q9NVM4 692 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 DZANK1Q9NVP4 752 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 LRWD1Q9UFC0 647 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 DPP7Q9UHL4 492 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 HCN4Q9Y3Q4 1203 aa10.12□□□□□ -0.79
HDAC9-211ENST00000430454 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-211ENST00000430454 FNDC1Q4ZHG4 1894 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-211ENST00000430454 POTEMA6NI47 508 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 LRRIQ4A6NIV6 560 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 PER2O15055 1255 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 LINC01565O15544 149 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 TSPAN1O60635 241 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 USO1O60763 962 aaKnown RBP10.11□□□□□ -0.79
HDAC9-211ENST00000430454 GPR37L1O60883 481 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 DTNBO60941 627 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 TBX10O75333 385 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 ATF7P17544 494 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-211ENST00000430454 COL9A1P20849 921 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 HOXA11P31270 313 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-211ENST00000430454 CCT6AP40227 531 aaKnown RBP10.11□□□□□ -0.79
HDAC9-211ENST00000430454 EFNA5P52803 228 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 RILPL1Q5EBL4 403 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 KRT79Q5XKE5 535 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 MCTP1Q6DN14 999 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 SLC27A1Q6PCB7 646 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 PADI6Q6TGC4 694 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 DTHD1Q6ZMT9 781 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 SMRP1Q8NCR6 262 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 DEPTORQ8TB45 409 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 PIGOQ8TEQ8 1089 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 KIFAP3Q92845 792 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 LPPQ93052 612 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 IGSF21Q96ID5 467 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 MSLNLQ96KJ4 702 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 NECTIN4Q96NY8 510 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 ADPGKQ9BRR6 497 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 GBP3Q9H0R5 595 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 CSRNP2Q9H175 543 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 TMEM60Q9H2L4 133 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 DNM3Q9UQ16 869 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 FAN1Q9Y2M0 1017 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 GIT1Q9Y2X7 761 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 ZMYM2Q9UBW7 1377 aa10.11□□□□□ -0.79
HDAC9-211ENST00000430454 MUC3AQ02505 3323 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-211ENST00000430454 C2orf71A6NGG8 1288 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 N4BP3O15049 544 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 ZBTB39O15060 712 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 GALTP07902 379 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 SPATA31C1P0DKV0 1188 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 CYP11B2P19099 503 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 GLRA2P23416 452 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 GTF2F1P35269 517 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC9-211ENST00000430454 PRPHP41219 470 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 MBTD1Q05BQ5 628 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 ITIH3Q06033 890 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 DLX2Q07687 328 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-211ENST00000430454 ST3GAL1Q11201 340 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 CAPSQ13938 189 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 MAPK6Q16659 721 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 LONRF3Q496Y0 759 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 ANKRD54Q6NXT1 300 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 VPS52Q8N1B4 723 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms