RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 HSCBQ8IWL3 235 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMC1A-203ENST00000428014 ZBTB8OSQ8IWT0 167 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 SYT2Q8N9I0 419 aaPredicted RBP10.12□□□□□ -0.79
SMC1A-203ENST00000428014 IFT74Q96LB3 600 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 NLRP4Q96MN2 994 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 FAM161BQ96MY7 647 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 CASD1Q96PB1 797 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 MMTAG2Q9BU76 263 aaKnown RBP10.12□□□□□ -0.79
SMC1A-203ENST00000428014 CSRNP2Q9H175 543 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 TMEM134Q9H6X4 195 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 THEGQ9P2T0 379 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 ODF2LQ9ULJ1 636 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 PLAGL2Q9UPG8 496 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 MTMR6Q9Y217 621 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 SRPRBQ9Y5M8 271 aaKnown RBP10.12□□□□□ -0.79
SMC1A-203ENST00000428014 IRAK3Q9Y616 596 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 A0A0C4DFX4 3053 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.11□□□□□ -0.79
SMC1A-203ENST00000428014 EPOPA6NHQ4 379 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 ACKR2O00590 384 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 UPP2O95045 317 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 POU5F1Q01860 360 aaKnown RBP10.11□□□□□ -0.79
SMC1A-203ENST00000428014 RESTQ13127 1097 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 GPM6BQ13491 265 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 SLC39A14Q15043 492 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 PTPAQ15257 358 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 IL17AQ16552 155 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 MAPK6Q16659 721 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 PPP1R15BQ5SWA1 713 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 TWF2Q6IBS0 349 aaKnown RBP10.11□□□□□ -0.79
SMC1A-203ENST00000428014 SLC27A1Q6PCB7 646 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 GLB1LQ6UWU2 654 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 C1orf186Q6ZWK4 172 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 ABI1Q8IZP0 508 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 PIGOQ8TEQ8 1089 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 TMEM143Q96AN5 459 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 TMEM175Q9BSA9 504 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 C17orf80Q9BSJ5 609 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 CCDC113Q9H0I3 377 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 NSUN3Q9H649 340 aaKnown RBP10.11□□□□□ -0.79
SMC1A-203ENST00000428014 NGRNQ9NPE2 291 aaKnown RBP10.11□□□□□ -0.79
SMC1A-203ENST00000428014 DDX19AQ9NUU7 478 aaKnown RBP10.11□□□□□ -0.79
SMC1A-203ENST00000428014 RNF19AQ9NV58 838 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 ARHGAP28Q9P2N2 729 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 STK17AQ9UEE5 414 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 KIAA1024Q9UPX6 916 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 PIN4Q9Y237 131 aaKnown RBP10.11□□□□□ -0.79
SMC1A-203ENST00000428014 GIT1Q9Y2X7 761 aa10.11□□□□□ -0.79
SMC1A-203ENST00000428014 MRPL42Q9Y6G3 142 aaKnown RBP10.11□□□□□ -0.79
SMC1A-203ENST00000428014 COL4A4P53420 1690 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 N4BP3O15049 544 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 ZBTB39O15060 712 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 TSPAN1O60635 241 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 USO1O60763 962 aaKnown RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 PPP6R2O75170 966 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 YEATS4O95619 227 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 BRD1O95696 1058 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 CTNNB1P35222 781 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 UBA7P41226 1012 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 ZNF131P52739 623 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 FOSBP53539 338 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 MRPS5P82675 430 aaKnown RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 BMS1Q14692 1282 aaKnown RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 SF3A1Q15459 793 aaKnown RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 CTC1Q2NKJ3 1217 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 TJAP1Q5JTD0 557 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 RINT1Q6NUQ1 792 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 TRMT1LQ7Z2T5 733 aaKnown RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 TMCO2Q7Z6W1 182 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 MICALL1Q8N3F8 863 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 SPPL3Q8TCT6 385 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 ASAP3Q8TDY4 903 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 CALML4Q96GE6 196 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 TSPAN18Q96SJ8 248 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 POLR3FQ9H1D9 316 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 ST6GALNAC4Q9H4F1 302 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 CWH43Q9H720 699 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 MINDY3Q9H8M7 445 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 LARSQ9P2J5 1176 aaKnown RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 PUF60Q9UHX1 559 aaKnown RBP10.1□□□□□ -0.79
SMC1A-203ENST00000428014 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 PRUNE2Q8WUY3 3088 aa10.1□□□□□ -0.79
SMC1A-203ENST00000428014 VWA3AA6NCI4 1184 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 TBKBP1A7MCY6 615 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 INO80B-WBP1J3KQ70 363 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 DTNBO60941 627 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 SRGAP2CP0DJJ0 459 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 MAPTP10636 758 aaKnown RBP10.09□□□□□ -0.79
SMC1A-203ENST00000428014 ARF4P18085 180 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-203ENST00000428014 IGFBP4P22692 258 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 TXLNAP40222 546 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 SMTNP53814 917 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 FOXK1P85037 733 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 KRT17Q04695 432 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 DMP1Q13316 513 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-203ENST00000428014 NBR1Q14596 966 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 ECM1Q16610 540 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms