RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 UBXN11Q5T124 520 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 AGMOQ6ZNB7 445 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 SLC39A11Q8N1S5 342 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 TMEM169Q96HH4 297 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 MSLNLQ96KJ4 702 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 NRDE2Q9H7Z3 1164 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 NOL7Q9UMY1 257 aaKnown RBP12.89□□□□□ -0.35
LINC00963-201ENST00000412141 HES2Q9Y543 173 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 B4GALT5O43286 388 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 ST18O60284 1047 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 B4GALT3O60512 393 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 TSPAN1O60635 241 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 ZNF623O75123 536 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 CD2BP2O95400 341 aaKnown RBP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 SSBP05455 408 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 ITGA4P13612 1032 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 ARL2P36404 184 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 CCT6AP40227 531 aaKnown RBP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 SLC11A1P49279 550 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 ZP2Q05996 745 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 NCBP1Q09161 790 aaKnown RBP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 SMAD2Q15796 467 aaKnown RBP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 DUSP6Q16828 381 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 TMEM31Q5JXX7 168 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 ADHFE1Q8IWW8 467 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 VPS52Q8N1B4 723 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 TMEM87AQ8NBN3 555 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 URGCPQ8TCY9 931 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 NACC1Q96RE7 527 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 TRAIPQ9BWF2 469 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 RSAD1Q9HA92 442 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 UPF2Q9HAU5 1272 aaKnown RBP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 TUFT1Q9NNX1 390 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 LZTS1Q9Y250 596 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 USP20Q9Y2K6 914 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-201ENST00000412141 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
LINC00963-201ENST00000412141 ARHGEF35A5YM69 484 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 DDHD2O94830 711 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 GALTP07902 379 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 SP100P23497 879 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 TOB1P50616 345 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 MBTD1Q05BQ5 628 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 PTGDRQ13258 359 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 ECM1Q16610 540 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 PDE12Q6L8Q7 609 aaKnown RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 NOTUMQ6P988 496 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 MRPL10Q7Z7H8 261 aaKnown RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 SMG8Q8ND04 991 aaKnown RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 FAM122AQ96E09 287 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 TMX3Q96JJ7 454 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 FAM193BQ96PV7 902 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 POLR3CQ9BUI4 534 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 TRIM6Q9C030 488 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-201ENST00000412141 IPPQ9Y573 584 aa12.87□□□□□ -0.35
LINC00963-201ENST00000412141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-201ENST00000412141 C2orf71A6NGG8 1288 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 PP2D1A8MPX8 630 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 PI4K2BG5E9Z4 385 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 NPTXRO95502 500 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 XRCC6P12956 609 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00963-201ENST00000412141 ARF4P18085 180 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-201ENST00000412141 AKAP5P24588 427 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 CDC25AP30304 524 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 MLH1P40692 756 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 SMC1AQ14683 1233 aaKnown RBP12.86□□□□□ -0.35
LINC00963-201ENST00000412141 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 C4orf32Q8N8J7 132 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 MRPL43Q8N983 215 aaKnown RBP12.86□□□□□ -0.35
LINC00963-201ENST00000412141 SMRP1Q8NCR6 262 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 IGSF21Q96ID5 467 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 GAD1Q99259 594 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 CDCA3Q99618 268 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-201ENST00000412141 CSRNP2Q9H175 543 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 NXF3Q9H4D5 531 aaKnown RBP12.86□□□□□ -0.35
LINC00963-201ENST00000412141 KLK14Q9P0G3 267 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 PRKAG3Q9UGI9 489 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
LINC00963-201ENST00000412141 TRIOO75962 3097 aa12.85□□□□□ -0.35
LINC00963-201ENST00000412141 H3BQV1 296 aa12.85□□□□□ -0.35
LINC00963-201ENST00000412141 GPR37L1O60883 481 aa12.85□□□□□ -0.35
LINC00963-201ENST00000412141 EYA4O95677 639 aa12.85□□□□□ -0.35
LINC00963-201ENST00000412141 NCLP19338 710 aaKnown RBP12.85□□□□□ -0.35
LINC00963-201ENST00000412141 U2AF2P26368 475 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00963-201ENST00000412141 RPA1P27694 616 aa12.85□□□□□ -0.35
LINC00963-201ENST00000412141 GJB2P29033 226 aa12.85□□□□□ -0.35
LINC00963-201ENST00000412141 OR1G1P47890 313 aa12.85□□□□□ -0.35
LINC00963-201ENST00000412141 TRAPPC10P48553 1259 aa12.85□□□□□ -0.35
LINC00963-201ENST00000412141 SCNN1GP51170 649 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms