RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 C10orf76Q5T2E6 689 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 MFSD14CQ5VZR4 134 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 C8orf74Q6P047 294 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SND1Q7KZF4 910 aaKnown RBP eCLIP17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GPIHBP1Q8IV16 184 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 HDAC7Q8WUI4 952 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CAVIN3Q969G5 261 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ZBTB9Q96C00 473 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GDAP1L1Q96MZ0 367 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 PLCB1Q9NQ66 1216 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 PDGFCQ9NRA1 345 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 DNM3Q9UQ16 869 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TRAF3IP3Q9Y228 551 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 PCDHGC5Q9Y5F6 944 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 POTEFA5A3E0 1075 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 BTNL10A8MVZ5 291 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CLSTN1O94985 981 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ZNF865P0CJ78 1059 aaPredicted RBP17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 NR2F2P24468 414 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 RPA1P27694 616 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 MATR3P43243 847 aaKnown RBP eCLIP17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 KCNH2Q12809 1159 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TTLL4Q14679 1199 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 LRCH2Q5VUJ6 765 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 POTEGQ6S5H5 508 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SYT2Q8N9I0 419 aaPredicted RBP17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 UIMC1Q96RL1 719 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PSMB7Q99436 277 aa17.33■□□□□ 0.36
CHRFAM7A-203ENST00000401522 NFASCO94856 1347 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CALUO43852 315 aaPredicted RBP17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PALMO75781 387 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GIT2Q14161 759 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ALS2CLQ60I27 953 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 IQSEC1Q6DN90 963 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 EPM2AIP1Q7L775 607 aaPredicted RBP17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CATSPER3Q86XQ3 398 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ZHX3Q9H4I2 956 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ARMCX3Q9UH62 379 aaPredicted RBP17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 BZW2Q9Y6E2 419 aaKnown RBP17.32■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GOLGA8KD6RF30 607 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 OPA1O60313 960 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GAS7O60861 476 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ARIH2O95376 493 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TXNP10599 105 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ELNP15502 786 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PPP2R5CQ13362 524 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 NEDD9Q14511 834 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 KNOP1Q1ED39 458 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 B3GNT9Q6UX72 402 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 IFT20Q8IY31 132 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 KCTD17Q8N5Z5 321 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 FAM76AQ8TAV0 307 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 RBM12Q9NTZ6 932 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PKD2L1Q9P0L9 805 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PTPN22Q9Y2R2 807 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 A0A087X0T9 212 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PDXKO00764 312 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 AFPP02771 609 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 HMGCRP04035 888 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 FAM228BP0C875 321 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 UBA1P22314 1058 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ANXA13P27216 316 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 LBX1P52954 281 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SLC7A5Q01650 507 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 LY6KQ17RY6 165 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 BMT2Q1RMZ1 405 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 MEI1Q5TIA1 1274 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 LRRC31Q6UY01 552 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SLAIN1Q8ND83 568 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TEKT3Q9BXF9 490 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SMARCAL1Q9NZC9 954 aa17.31■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ATP8B3O60423 1300 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GOLGA6CA6NDK9 693 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CES2O00748 559 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SLC16A3O15427 465 aaKnown RBP17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GOLGA6DP0CG33 693 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CYBAP13498 195 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 KLRC1P26715 233 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ADCYAP1R1P41586 468 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 IRX5P78411 483 aaPredicted RBP17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CACNB2Q08289 660 aaPredicted RBP17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 KIAA0753Q2KHM9 967 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SFR1Q86XK3 245 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 RIN2Q8WYP3 895 aaPredicted RBP17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SH3GL2Q99962 352 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 REEP2Q9BRK0 252 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 BCAS3Q9H6U6 928 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 METTL14Q9HCE5 456 aaKnown RBP17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GOLGA6AQ9NYA3 693 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 EHD2Q9NZN4 543 aa17.3■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SHOX2O60902 331 aaPredicted RBP17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 EPB41P11171 864 aaKnown RBP17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GRK4P32298 578 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CASP5P51878 434 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms