RNA–Protein interactions for RNA: ENST00000399069.7

LCMT1-203, Transcript of leucine carboxyl methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCMT1, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-203ENST00000399069 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
LCMT1-203ENST00000399069 VSTM4Q8IW00 320 aa16.02■□□□□ 0.16
LCMT1-203ENST00000399069 FAM186BQ8IYM0 893 aa16.02■□□□□ 0.16
LCMT1-203ENST00000399069 XXYLT1Q8NBI6 393 aa16.02■□□□□ 0.16
LCMT1-203ENST00000399069 TRIM44Q96DX7 344 aaPredicted RBP16.02■□□□□ 0.16
LCMT1-203ENST00000399069 TSEN34Q9BSV6 310 aaKnown RBP16.02■□□□□ 0.16
LCMT1-203ENST00000399069 CCDC113Q9H0I3 377 aa16.02■□□□□ 0.16
LCMT1-203ENST00000399069 INTS13Q9NVM9 706 aa16.02■□□□□ 0.16
LCMT1-203ENST00000399069 EXOC3O60645 756 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 AKAP3O75969 853 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 PRKCBP05771 671 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 KCNA10Q16322 511 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 VWA3BQ502W6 1294 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 TAF2Q6P1X5 1199 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 TMC6Q7Z403 805 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 SESTD1Q86VW0 696 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 TRIM59Q8IWR1 403 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 DNAJC5GQ8N7S2 189 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 SCLT1Q96NL6 688 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 MRPL4Q9BYD3 311 aaKnown RBP16.01■□□□□ 0.15
LCMT1-203ENST00000399069 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.01■□□□□ 0.15
LCMT1-203ENST00000399069 PRMT7Q9NVM4 692 aaPredicted RBP16.01■□□□□ 0.15
LCMT1-203ENST00000399069 HSPBP1Q9NZL4 362 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 HDAC6Q9UBN7 1215 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 GTF2IRD1Q9UHL9 959 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
LCMT1-203ENST00000399069 ITIH6Q6UXX5 1313 aa16.01■□□□□ 0.15
LCMT1-203ENST00000399069 TRIP12Q14669 1992 aaPredicted RBP16.01■□□□□ 0.15
LCMT1-203ENST00000399069 VTNP04004 478 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
LCMT1-203ENST00000399069 GPC3P51654 580 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 UBXN1Q04323 297 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 NBPF20Q3BBV1 942 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 SLC9C1Q4G0N8 1177 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 SPECC1LQ69YQ0 1117 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 KIAA0319LQ8IZA0 1049 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 NME8Q8N427 588 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 SPC24Q8NBT2 197 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 ARRDC4Q8NCT1 418 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 NLRP7Q8WX94 980 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 POMGNT1Q8WZA1 660 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 ZBTB10Q96DT7 871 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 PRIMPOLQ96LW4 560 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 CBWD1Q9BRT8 395 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 NDST4Q9H3R1 872 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 KIAA1586Q9HCI6 787 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 A0A1W2PQC6 194 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 INO80B-WBP1J3KQ70 363 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 GJB1P08034 283 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 KRT13P13646 458 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 GSDMDP57764 484 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 MBTD1Q05BQ5 628 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 PTPN11Q06124 597 aaPredicted RBP16■□□□□ 0.15
LCMT1-203ENST00000399069 TRIM14Q14142 442 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 PCBP1Q15365 356 aaKnown RBP eCLIP16■□□□□ 0.159e-6■■■□□ 18.2
LCMT1-203ENST00000399069 FAM187BQ17R55 369 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 MIIPQ5JXC2 388 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 INTS8Q75QN2 995 aaKnown RBP16■□□□□ 0.15
LCMT1-203ENST00000399069 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 SH3TC2Q8TF17 1288 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 INO80BQ9C086 356 aaPredicted RBP16■□□□□ 0.15
LCMT1-203ENST00000399069 FAM49AQ9H0Q0 323 aaPredicted RBP16■□□□□ 0.15
LCMT1-203ENST00000399069 STYXL1Q9Y6J8 313 aa16■□□□□ 0.15
LCMT1-203ENST00000399069 A0A087WZ62 844 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 TISP43B9A030 160 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 ANKRD63C9JTQ0 380 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 ACKR2O00590 384 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 TEX33O43247 280 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 TREHO43280 583 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 TOM1L1O75674 476 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 LDHAP00338 332 aaKnown RBP15.99■□□□□ 0.15
LCMT1-203ENST00000399069 PBX1P40424 430 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 CASP4P49662 377 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 ACLYP53396 1101 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 NLRP11P59045 1033 aaKnown RBP15.99■□□□□ 0.15
LCMT1-203ENST00000399069 HS1BP3Q53T59 392 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 FAM47CQ5HY64 1035 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 LHX8Q68G74 356 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 SLC39A4Q6P5W5 647 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 USP37Q86T82 979 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 GPD1LQ8N335 351 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 IQCDQ96DY2 449 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 GLT1D1Q96MS3 346 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 FDXACB1Q9BRP7 624 aaPredicted RBP15.99■□□□□ 0.15
LCMT1-203ENST00000399069 FZD8Q9H461 694 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 PCIF1Q9H4Z3 704 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 IFT122Q9HBG6 1241 aa15.99■□□□□ 0.15
LCMT1-203ENST00000399069 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.99■□□□□ 0.15
LCMT1-203ENST00000399069 KBTBD13C9JR72 458 aa15.98■□□□□ 0.15
LCMT1-203ENST00000399069 TPM1P09493 284 aa15.98■□□□□ 0.15
LCMT1-203ENST00000399069 ADSSP30520 456 aa15.98■□□□□ 0.15
LCMT1-203ENST00000399069 MATR3P43243 847 aaKnown RBP eCLIP15.98■□□□□ 0.152e-6■□□□□ 10.7
LCMT1-203ENST00000399069 ENPEPQ07075 957 aa15.98■□□□□ 0.15
LCMT1-203ENST00000399069 BFSP1Q12934 665 aa15.98■□□□□ 0.15
LCMT1-203ENST00000399069 PRPF4BQ13523 1007 aaKnown RBP15.98■□□□□ 0.15
LCMT1-203ENST00000399069 TMEM132AQ24JP5 1023 aa15.98■□□□□ 0.15
LCMT1-203ENST00000399069 DCAF17Q5H9S7 520 aaPredicted RBP15.98■□□□□ 0.15
LCMT1-203ENST00000399069 CTU1Q7Z7A3 348 aaKnown RBP15.98■□□□□ 0.15
LCMT1-203ENST00000399069 RSPH3Q86UC2 560 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms