RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 ERLIN2O94905 339 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 WEE2P0C1S8 567 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 EPCAMP16422 314 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 SLC11A1P49279 550 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 CYP4A11Q02928 519 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 LAMTOR4Q0VGL1 99 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 MTMR3Q13615 1198 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 EMC2Q15006 297 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 XKR9Q5GH70 373 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 AGMOQ6ZNB7 445 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 CABP7Q86V35 215 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 ZNF280BQ86YH2 543 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 C4orf19Q8IY42 314 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 SLFN12Q8IYM2 578 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 C12orf76Q8N812 135 aaPredicted RBP12.42□□□□□ -0.42
SRMP1-201ENST00000398959 KREMEN2Q8NCW0 462 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 BCL7CQ8WUZ0 217 aaPredicted RBP12.42□□□□□ -0.42
SRMP1-201ENST00000398959 WASF1Q92558 559 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 HAS1Q92839 578 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 ASIC4Q96FT7 647 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 DYDC2Q96IM9 177 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 MINDY3Q9H8M7 445 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 BRMS1Q9HCU9 246 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 GJB4Q9NTQ9 266 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 RGL1Q9NZL6 768 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 STK39Q9UEW8 545 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 DBR1Q9UK59 544 aaKnown RBP12.42□□□□□ -0.42
SRMP1-201ENST00000398959 TPCN1Q9ULQ1 816 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 SORCS3Q9UPU3 1222 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 ASAP2O43150 1006 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 DTNBO60941 627 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 ALDH2P05091 517 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 SSBP05455 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
SRMP1-201ENST00000398959 KRT2P35908 639 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 CTTNQ14247 550 aaKnown RBP12.41□□□□□ -0.42
SRMP1-201ENST00000398959 ANKRD1Q15327 319 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 ATAT1Q5SQI0 421 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 KIAA1841Q6NSI8 718 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 USP34Q70CQ2 3546 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 FERMT3Q86UX7 667 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 PPFIBP1Q86W92 1011 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 TPH2Q8IWU9 490 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 UBALD2Q8IYN6 164 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 TDRD5Q8NAT2 981 aaKnown RBP12.41□□□□□ -0.42
SRMP1-201ENST00000398959 RNF149Q8NC42 400 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 CCDC43Q96MW1 224 aaKnown RBP12.41□□□□□ -0.42
SRMP1-201ENST00000398959 MTRQ99707 1265 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 KANSL3Q9P2N6 904 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 ORC3Q9UBD5 711 aaPredicted RBP12.41□□□□□ -0.42
SRMP1-201ENST00000398959 FAN1Q9Y2M0 1017 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 MYH11P35749 1972 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 DOCK8Q8NF50 2099 aa12.41□□□□□ -0.42
SRMP1-201ENST00000398959 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 ZBTB39O15060 712 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 B4GALT3O60512 393 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 DDHD2O94830 711 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 POMCP01189 267 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 KLRC2P26717 231 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 HOXA11P31270 313 aaPredicted RBP12.4□□□□□ -0.42
SRMP1-201ENST00000398959 VCPP55072 806 aaKnown RBP12.4□□□□□ -0.42
SRMP1-201ENST00000398959 NR5A1Q13285 461 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 MXD4Q14582 209 aaPredicted RBP12.4□□□□□ -0.42
SRMP1-201ENST00000398959 PTPN14Q15678 1187 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 EARS2Q5JPH6 523 aaKnown RBP12.4□□□□□ -0.42
SRMP1-201ENST00000398959 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 MRPL10Q7Z7H8 261 aaKnown RBP12.4□□□□□ -0.42
SRMP1-201ENST00000398959 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 SLC22A17Q8WUG5 538 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 TMEM175Q9BSA9 504 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 VN1R3Q9BXE9 311 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 EMILIN2Q9BXX0 1053 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 SFXN1Q9H9B4 322 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 UBN1Q9NPG3 1134 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 DOCK6Q96HP0 2047 aa12.4□□□□□ -0.42
SRMP1-201ENST00000398959 NRP1O14786 923 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 CTDNEP1O95476 244 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 BRD1O95696 1058 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 PDGFBP01127 241 aaPredicted RBP12.39□□□□□ -0.43
SRMP1-201ENST00000398959 ITGA4P13612 1032 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
SRMP1-201ENST00000398959 AVPR2P30518 371 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 AXLP30530 894 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
SRMP1-201ENST00000398959 AK2P54819 239 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 SPIRE1Q08AE8 756 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 NCBP1Q09161 790 aaKnown RBP12.39□□□□□ -0.43
SRMP1-201ENST00000398959 TCF15Q12870 199 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 TFDP1Q14186 410 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 PCBP1Q15365 356 aaKnown RBP eCLIP12.39□□□□□ -0.43
SRMP1-201ENST00000398959 CALCRLQ16602 461 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 UBXN11Q5T124 520 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 NOTUMQ6P988 496 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 TMC5Q6UXY8 1006 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 CPB2Q96IY4 423 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 PHOX2BQ99453 314 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 EIF2AK1Q9BQI3 630 aaKnown RBP12.39□□□□□ -0.43
SRMP1-201ENST00000398959 MRPL17Q9NRX2 175 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms