RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 UBAC1Q9BSL1 405 aa9.03□□□□□ -0.96
CASP4-201ENST00000393150 FAM49AQ9H0Q0 323 aaPredicted RBP9.03□□□□□ -0.96
CASP4-201ENST00000393150 SENP2Q9HC62 589 aa9.03□□□□□ -0.96
CASP4-201ENST00000393150 HELLSQ9NRZ9 838 aa9.03□□□□□ -0.96
CASP4-201ENST00000393150 TRPV2Q9Y5S1 764 aa9.03□□□□□ -0.96
CASP4-201ENST00000393150 LCTP09848 1927 aa9.02□□□□□ -0.96
CASP4-201ENST00000393150 ACACBO00763 2458 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 TTC3P53804 2025 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 KIAA1217Q5T5P2 1943 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 A0A1W2PNR3 127 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 PRR5-ARHGAP8B1AHC4 643 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 ZNF213O14771 459 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 GPR182O15218 404 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 FGAP02671 866 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 ASGR2P07307 311 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 HOXA13P31271 388 aaPredicted RBP9.02□□□□□ -0.97
CASP4-201ENST00000393150 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
CASP4-201ENST00000393150 ARHGAP8P85298 464 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 PLCB3Q01970 1234 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 GIT2Q14161 759 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 ST3GAL2Q16842 350 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 MCMDC2Q4G0Z9 681 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 SLC24A5Q71RS6 500 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 TREML1Q86YW5 311 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 SIRT2Q8IXJ6 389 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 COLGALT1Q8NBJ5 622 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 SEPT1Q8WYJ6 367 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 ZNF558Q96NG5 402 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 RUBCNLQ9H714 662 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 GPAMQ9HCL2 828 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 NCDNQ9UBB6 729 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 PADI3Q9ULW8 664 aa9.02□□□□□ -0.97
CASP4-201ENST00000393150 NCOR2Q9Y618 2525 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 DMDP11532 3685 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 CCER2I3L3R5 266 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 OPLAHO14841 1288 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 ZBTB5O15062 677 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 KINO60870 393 aaKnown RBP9.01□□□□□ -0.97
CASP4-201ENST00000393150 RPS6KA5O75582 802 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 MARK3P27448 753 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 TCF7P36402 384 aaPredicted RBP9.01□□□□□ -0.97
CASP4-201ENST00000393150 ERVFC1P60507 584 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 HAND2P61296 217 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 KRT76Q01546 638 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 MGAT3Q09327 533 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 TBC1D8BQ0IIM8 1120 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 UBAP2LQ14157 1087 aaKnown RBP9.01□□□□□ -0.97
CASP4-201ENST00000393150 RSPO4Q2I0M5 234 aaPredicted RBP9.01□□□□□ -0.97
CASP4-201ENST00000393150 RARS2Q5T160 578 aaKnown RBP9.01□□□□□ -0.97
CASP4-201ENST00000393150 TSHZ3Q63HK5 1081 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 SYCE2Q6PIF2 218 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 CCDC149Q6ZUS6 474 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 CABP7Q86V35 215 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 PPFIBP1Q86W92 1011 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 TICAM2Q86XR7 235 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 SMARCC2Q8TAQ2 1214 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 EVI5LQ96CN4 794 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 CELF4Q9BZC1 486 aaKnown RBP9.01□□□□□ -0.97
CASP4-201ENST00000393150 CPVLQ9H3G5 476 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 POMKQ9H5K3 350 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 JMJD4Q9H9V9 463 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 TYW1Q9NV66 732 aaKnown RBP9.01□□□□□ -0.97
CASP4-201ENST00000393150 RTEL1Q9NZ71 1219 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 SPG21Q9NZD8 308 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 IGSF9Q9P2J2 1179 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 DCTN4Q9UJW0 460 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 GINS2Q9Y248 185 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 MYO10Q9HD67 2058 aa9.01□□□□□ -0.97
CASP4-201ENST00000393150 PLXNA3P51805 1871 aa9□□□□□ -0.97
CASP4-201ENST00000393150 CHD8Q9HCK8 2581 aa9□□□□□ -0.97
CASP4-201ENST00000393150 KLRF2D3W0D1 207 aa9□□□□□ -0.97
CASP4-201ENST00000393150 FSCN2O14926 492 aa9□□□□□ -0.97
CASP4-201ENST00000393150 MICAL2O94851 1124 aa9□□□□□ -0.97
CASP4-201ENST00000393150 EOMESO95936 686 aa9□□□□□ -0.97
CASP4-201ENST00000393150 ZSCAN20P17040 1043 aaPredicted RBP9□□□□□ -0.97
CASP4-201ENST00000393150 ALDH7A1P49419 539 aaKnown RBP9□□□□□ -0.97
CASP4-201ENST00000393150 ADAM17P78536 824 aa9□□□□□ -0.97
CASP4-201ENST00000393150 RBM10P98175 930 aaKnown RBP9□□□□□ -0.97
CASP4-201ENST00000393150 DMWDQ09019 674 aa9□□□□□ -0.97
CASP4-201ENST00000393150 ARSJQ5FYB0 599 aaPredicted RBP9□□□□□ -0.97
CASP4-201ENST00000393150 IFIT1BQ5T764 474 aaKnown RBP9□□□□□ -0.97
CASP4-201ENST00000393150 ALKBH2Q6NS38 261 aa9□□□□□ -0.97
CASP4-201ENST00000393150 KIAA1841Q6NSI8 718 aa9□□□□□ -0.97
CASP4-201ENST00000393150 LRRC69Q6ZNQ3 347 aa9□□□□□ -0.97
CASP4-201ENST00000393150 STAMQ92783 540 aa9□□□□□ -0.97
CASP4-201ENST00000393150 ZKSCAN3Q9BRR0 538 aa9□□□□□ -0.97
CASP4-201ENST00000393150 OSBPL7Q9BZF2 842 aa9□□□□□ -0.97
CASP4-201ENST00000393150 AGO3Q9H9G7 860 aaKnown RBP9□□□□□ -0.97
CASP4-201ENST00000393150 CUEDC1Q9NWM3 386 aaPredicted RBP9□□□□□ -0.97
CASP4-201ENST00000393150 DLL3Q9NYJ7 618 aa9□□□□□ -0.97
CASP4-201ENST00000393150 STK39Q9UEW8 545 aa9□□□□□ -0.97
CASP4-201ENST00000393150 DPP7Q9UHL4 492 aa9□□□□□ -0.97
CASP4-201ENST00000393150 IGSF9BQ9UPX0 1349 aa8.99□□□□□ -0.97
CASP4-201ENST00000393150 ERICH2A1L162 156 aa8.99□□□□□ -0.97
CASP4-201ENST00000393150 MBLAC1A4D2B0 266 aaPredicted RBP8.99□□□□□ -0.97
CASP4-201ENST00000393150 CXCL14O95715 111 aa8.99□□□□□ -0.97
CASP4-201ENST00000393150 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
CASP4-201ENST00000393150 GHRHRQ02643 423 aa8.99□□□□□ -0.97
CASP4-201ENST00000393150 LMNB2Q03252 620 aa8.99□□□□□ -0.97
CASP4-201ENST00000393150 APOBRQ0VD83 1088 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms