RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 MAP3K7O43318 606 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 RCN1Q15293 331 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 USP17L6PQ6QN14 398 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 FITM2Q8N6M3 262 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 CNBD1Q8NA66 436 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 PPP1R14CQ8TAE6 165 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
SHOX-203ENST00000381578 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 RMDN2Q96LZ7 410 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 ERVK-5Q9HDB9 667 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
SHOX-203ENST00000381578 RARAP10276 462 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
SHOX-203ENST00000381578 SNAP25P60880 206 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 MRPS35P82673 323 aaKnown RBP13.03□□□□□ -0.32
SHOX-203ENST00000381578 DEUP1Q05D60 604 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 CNGA2Q16280 664 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
SHOX-203ENST00000381578 C4orf32Q8N8J7 132 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 GPR101Q96P66 508 aaPredicted RBP13.03□□□□□ -0.32
SHOX-203ENST00000381578 PSTPIP2Q9H939 334 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 ATP8A2Q9NTI2 1148 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 BLOC1S4Q9NUP1 217 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 LAMB4A4D0S4 1761 aa13.03□□□□□ -0.32
SHOX-203ENST00000381578 DDX39AO00148 427 aaKnown RBP13.02□□□□□ -0.32
SHOX-203ENST00000381578 RIMBP2O15034 1052 aa13.02□□□□□ -0.32
SHOX-203ENST00000381578 CIB2O75838 187 aa13.02□□□□□ -0.32
SHOX-203ENST00000381578 NR3C1P04150 777 aa13.02□□□□□ -0.32
SHOX-203ENST00000381578 KRT17Q04695 432 aa13.02□□□□□ -0.32
SHOX-203ENST00000381578 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.32
SHOX-203ENST00000381578 HAUS1Q96CS2 278 aa13.02□□□□□ -0.32
SHOX-203ENST00000381578 RILPQ96NA2 401 aa13.02□□□□□ -0.32
SHOX-203ENST00000381578 MTA3Q9BTC8 594 aa13.02□□□□□ -0.32
SHOX-203ENST00000381578 CDC42EP4Q9H3Q1 356 aaKnown RBP13.02□□□□□ -0.32
SHOX-203ENST00000381578 PODXLO00592 558 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 ATF7P17544 494 aaPredicted RBP13.02□□□□□ -0.33
SHOX-203ENST00000381578 USP4Q13107 963 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 LRRC55Q6ZSA7 311 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 KCTD1Q719H9 257 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 KRT27Q7Z3Y8 459 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 TRIM59Q8IWR1 403 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 JDP2Q8WYK2 163 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 CEP63Q96MT8 703 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 PIDD1Q9HB75 910 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 SUCLA2Q9P2R7 463 aaPredicted RBP13.02□□□□□ -0.33
SHOX-203ENST00000381578 ZMYND8Q9ULU4 1186 aaPredicted RBP13.02□□□□□ -0.33
SHOX-203ENST00000381578 CORO1CQ9ULV4 474 aaPredicted RBP13.02□□□□□ -0.33
SHOX-203ENST00000381578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
SHOX-203ENST00000381578 FAM187AA6NFU0 413 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 MYBP10242 640 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 ESRRAP11474 423 aaPredicted RBP13.02□□□□□ -0.33
SHOX-203ENST00000381578 MARCKSL1P49006 195 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 PPP1R21Q6ZMI0 780 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 NT5DC3Q86UY8 548 aa13.02□□□□□ -0.33
SHOX-203ENST00000381578 SH3RF3Q8TEJ3 882 aaPredicted RBP13.02□□□□□ -0.33
SHOX-203ENST00000381578 H0YGN5 161 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 CAPN9O14815 690 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 CYTH3O43739 400 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 CREB3O43889 395 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 PIAS1O75925 651 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 CHRNA3P32297 505 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 TMED1Q13445 227 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 EXOC3L1Q86VI1 746 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 DGKHQ86XP1 1220 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 KRT35Q92764 455 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 FAM161BQ96MY7 647 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 SAYSD1Q9NPB0 183 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 SLCO1B3Q9NPD5 702 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 ZNF148Q9UQR1 794 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 NFS1Q9Y697 457 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 BCL9LQ86UU0 1499 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 DDX3XO00571 662 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHOX-203ENST00000381578 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHOX-203ENST00000381578 NOL4O94818 638 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 PON1P27169 355 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 MAGEC3Q8TD91 643 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 PNMA5Q96PV4 448 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 MYLK2Q9H1R3 596 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 RXFP1Q9HBX9 757 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 HOMER2Q9NSB8 354 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
SHOX-203ENST00000381578 RIPK2O43353 540 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 BCRP11274 1271 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 COMTP21964 271 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 AUHQ13825 339 aaKnown RBP13.01□□□□□ -0.33
SHOX-203ENST00000381578 UBAP2Q5T6F2 1119 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms