RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 CASP1P29466 404 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 CCNA1P78396 465 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 PAK1Q13153 545 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 GRM4Q14833 912 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 RNF207Q6ZRF8 634 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 NOA1Q8NC60 698 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 ACER1Q8TDN7 264 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 NOC4LQ9BVI4 516 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 RPAP3Q9H6T3 665 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 POLR3EQ9NVU0 708 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 GRIN2DO15399 1336 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 HTR3EA5X5Y0 456 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 USO1O60763 962 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 ENTPD3O75355 529 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 SPATA31D3P0C874 917 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 HPDP32754 393 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 ECE1P42892 770 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 DYNC1I2Q13409 638 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 MTF1Q14872 753 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 SPATA31D4Q6ZUB0 917 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 SMC1BQ8NDV3 1235 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 CAPZA3Q96KX2 299 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 CTAGE1Q96RT6 745 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 RMDN3Q96TC7 470 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 XPO4Q9C0E2 1151 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 TRIM33Q9UPN9 1127 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 POTEMA6NI47 508 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 SERPINB4P48594 390 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 NEK2P51955 445 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 GSDMDP57764 484 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 PPP4CP60510 307 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 C16orf86Q6ZW13 317 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 EXOC3L1Q86VI1 746 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 CYP4X1Q8N118 509 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 VPS52Q8N1B4 723 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 C1orf131Q8NDD1 294 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 AGBL3Q8NEM8 1001 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 C2orf49Q9BVC5 232 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 ETNK2Q9NVF9 386 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 GGT7Q9UJ14 662 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 RCOR1Q9UKL0 485 aa11.62□□□□□ -0.55
PCDHGA1-201ENST00000378105 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 CCR3P51677 355 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 NBPF12Q5TAG4 269 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 KAZNQ674X7 775 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 ZNF365Q70YC5 407 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 ZNF473Q8WTR7 871 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 DCAF4Q8WV16 495 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 WDR60Q8WVS4 1066 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 NELFBQ8WX92 580 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 SPOCK3Q9BQ16 436 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 CEP44Q9C0F1 390 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 SUCLA2Q9P2R7 463 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 MYH2Q9UKX2 1941 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 A6NHS1 94 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 EXOC3O60645 756 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 LRRC41Q15345 812 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 RASGRP2Q7LDG7 609 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 NOP9Q86U38 636 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 TMEM87AQ8NBN3 555 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 CCT7Q99832 543 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 HSPA1AP0DMV8 641 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 HSPA1BP0DMV9 641 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 IL1R1P14778 569 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 ELF3P78545 371 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 DUS1LQ6P1R4 473 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 ZFPM1Q8IX07 1006 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 SLFN12Q8IYM2 578 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 MLKLQ8NB16 471 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 BHMTQ93088 406 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 PPP1R16BQ96T49 567 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 IMPG2Q9BZV3 1241 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 FAM184BQ9ULE4 1060 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 PCDHA6Q9UN73 950 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 CARD8Q9Y2G2 431 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 SH3GLB1Q9Y371 365 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 PCDHA8Q9Y5H6 950 aa11.61□□□□□ -0.55
PCDHGA1-201ENST00000378105 MCM3P25205 808 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 CYP2J2P51589 502 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 NLRP12P59046 1061 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 KCNA1Q09470 495 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 MAP1SQ66K74 1059 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 VPS50Q96JG6 964 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 DDX4Q9NQI0 724 aaKnown RBP11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 PP2D1A8MPX8 630 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 MARK3P27448 753 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 GSTT1P30711 240 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 FANCCQ00597 558 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 SLMAPQ14BN4 828 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 CRY1Q16526 586 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 MAP7D3Q8IWC1 876 aa11.6□□□□□ -0.55
PCDHGA1-201ENST00000378105 CERS5Q8N5B7 392 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms