RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 SEMA4AQ9H3S1 761 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 ETNK1Q9HBU6 452 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 CYP39A1Q9NYL5 469 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 PODXLO00592 558 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 RIPK2O43353 540 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 HSPA6P17066 643 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 RAD23BP54727 409 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 NAPAP54920 295 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 KLC1Q07866 573 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 SNX1Q13596 522 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 ACVR2BQ13705 512 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 KRT79Q5XKE5 535 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 EXOC3L1Q86VI1 746 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 VCXQ9H320 206 aa16.05■□□□□ 0.16
UBAP1-202ENST00000359544 GFPT2O94808 682 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 RARGP13631 454 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 SLCO1A2P46721 670 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 GTF2IP78347 998 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 CALCRLQ16602 461 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 ZC3H3Q8IXZ2 948 aaKnown RBP16.04■□□□□ 0.16
UBAP1-202ENST00000359544 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 CKAP2Q8WWK9 683 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 CRNKL1Q9BZJ0 848 aaKnown RBP16.04■□□□□ 0.16
UBAP1-202ENST00000359544 CD209Q9NNX6 404 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 GRHL1Q9NZI5 618 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 TRIM33Q9UPN9 1127 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 NR2E1Q9Y466 385 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 NCANO14594 1321 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 DDX3YO15523 660 aaKnown RBP16.04■□□□□ 0.16
UBAP1-202ENST00000359544 BAG3O95817 575 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 CHRNA3P32297 505 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 KCTD19Q17RG1 926 aaPredicted RBP16.04■□□□□ 0.16
UBAP1-202ENST00000359544 TMEM119Q4V9L6 283 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 MGARPQ8TDB4 240 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 SNX29Q8TEQ0 813 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 FAM84BQ96KN1 310 aaPredicted RBP16.04■□□□□ 0.16
UBAP1-202ENST00000359544 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
UBAP1-202ENST00000359544 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
UBAP1-202ENST00000359544 TMEM120BA0PK00 339 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 CETN3O15182 167 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 PHF2O75151 1096 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 EPHX2P34913 555 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 PDIA5Q14554 519 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 LRRC14Q15048 493 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 INTS8Q75QN2 995 aaKnown RBP16.03■□□□□ 0.16
UBAP1-202ENST00000359544 SAMD7Q7Z3H4 446 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 SH3TC2Q8TF17 1288 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 GLG1Q92896 1179 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 MTMR9Q96QG7 549 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 LRMDAQ9H2I8 198 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 RGL1Q9NZL6 768 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 HACL1Q9UJ83 578 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 DBR1Q9UK59 544 aaKnown RBP16.03■□□□□ 0.16
UBAP1-202ENST00000359544 HDAC9Q9UKV0 1011 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 ACTN1P12814 892 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 KRT13P13646 458 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 PEX5P50542 639 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 ADAM9Q13443 819 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 EDRF1Q3B7T1 1238 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBAP1-202ENST00000359544 TBCKQ8TEA7 893 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 RFFLQ8WZ73 363 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 ARHGEF2Q92974 986 aaKnown RBP16.03■□□□□ 0.16
UBAP1-202ENST00000359544 SERPINB12Q96P63 405 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 DCP1AQ9NPI6 582 aaPredicted RBP16.03■□□□□ 0.16
UBAP1-202ENST00000359544 IRAK4Q9NWZ3 460 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 WDR35Q9P2L0 1181 aa16.03■□□□□ 0.16
UBAP1-202ENST00000359544 NKX1-2Q9UD57 310 aaPredicted RBP16.03■□□□□ 0.16
UBAP1-202ENST00000359544 SMCO2A6NFE2 343 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 SPDYE5A6NIY4 337 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 TULP1O00294 542 aaPredicted RBP16.02■□□□□ 0.16
UBAP1-202ENST00000359544 CYTH3O43739 400 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 PEX11AO75192 247 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 AFPP02771 609 aaKnown RBP16.02■□□□□ 0.16
UBAP1-202ENST00000359544 TPBGLP0DKB5 382 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 FGFR4P22455 802 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 TNIP1Q15025 636 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 SETDB1Q15047 1291 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 EXOC3L4Q17RC7 722 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 DCAF12L1Q5VU92 463 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 CCDC65Q8IXS2 484 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 ENDOVQ8N8Q3 282 aaKnown RBP16.02■□□□□ 0.16
UBAP1-202ENST00000359544 U2AF1L4Q8WU68 220 aaKnown RBP16.02■□□□□ 0.16
UBAP1-202ENST00000359544 DNAJC19Q96DA6 116 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 RMDN2Q96LZ7 410 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 TMEM237Q96Q45 408 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 TRIM4Q9C037 500 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 ERVK-5Q9HDB9 667 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 SCAF8Q9UPN6 1271 aaKnown RBP16.02■□□□□ 0.16
UBAP1-202ENST00000359544 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 C2CD2Q9Y426 696 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.16
UBAP1-202ENST00000359544 GALCP54803 685 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 LAMB3Q13751 1172 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 UBE4AQ14139 1066 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms