RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ZHX2Q9Y6X8 837 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 SHROOM2Q13796 1616 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 FSBPO95073 299 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 RTN3O95197 1032 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 MOCS3O95396 460 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 FAAH2Q6GMR7 532 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 COG1Q8WTW3 980 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 AP3B1O00203 1094 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 CDR2Q01850 454 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 ZCWPW2Q504Y3 356 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 CYB5R4Q7L1T6 521 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 TRIM56Q9BRZ2 755 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 DNAJC17Q9NVM6 304 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 GOLGA8QA0A0J9YX86 632 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 GOLGA8OA6NCC3 632 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 SOWAHDA6NJG2 315 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 GOLGA8NF8WBI6 632 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 LDHAP00338 332 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 PEX3P56589 373 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 GSCP56915 257 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 PPP2R5EQ16537 467 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 MAGOHBQ96A72 148 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 WRNIP1Q96S55 665 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 BHMT2Q9H2M3 363 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 ATAD3AQ9NVI7 634 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 ACTN1P12814 892 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 PTPREP23469 700 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 EEF1B2P24534 225 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 BPIFB4P59827 614 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 MAN2A1Q16706 1144 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 OR6B2Q6IFH4 312 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 MCUQ8NE86 351 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 FBXL5Q9UKA1 691 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 KRT1P04264 644 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 SERPINB10P48595 397 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 TRIP13Q15645 432 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 FAM160B2Q86V87 743 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 CYFIP2Q96F07 1278 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 PAWRQ96IZ0 340 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 TMEM206Q9H813 350 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 HPCAL4Q9UM19 191 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 TMEM179Q6ZVK1 233 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 CDHR1Q96JP9 859 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 ZNF668Q96K58 619 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 TMCO1Q9UM00 188 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 RWDD3Q9Y3V2 267 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 ABCB11O95342 1321 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 MYL1P05976 194 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 KRT3P12035 628 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 CASP1P29466 404 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 PRPSAP1Q14558 356 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 RAPH1Q70E73 1250 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 CDH24Q86UP0 819 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 RASSF3Q86WH2 238 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 FOXP4Q8IVH2 680 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 MSTO1Q9BUK6 570 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 STK17AQ9UEE5 414 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 ZFP69BQ9UJL9 534 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 OCM2P0CE71 109 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 OCMP0CE72 109 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 EEF1GP26641 437 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 HDLBPQ00341 1268 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 FKBP3Q00688 224 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 NFX1Q12986 1120 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 USP17L6PQ6QN14 398 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 SLC17A8Q8NDX2 589 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 SRPRBQ9Y5M8 271 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-202ENST00000348513 hCG_1984214I3L0E3 225 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 PYGLP06737 847 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 GPSM2P81274 684 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 FCHO2Q0JRZ9 810 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 RESTQ13127 1097 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 NECTIN1Q15223 517 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 CLEC4GQ6UXB4 293 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 DRAXINQ8NBI3 349 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 CALN1Q9BXU9 219 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 TMEM260Q9NX78 707 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 CHD1O14646 1710 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 POTEMA6NI47 508 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms