RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 TFDP1Q14186 410 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 DSC3Q14574 896 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 FAM102BQ5T8I3 360 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 GRAMD1CQ8IYS0 662 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 CEP57L1Q8IYX8 460 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 IQUBQ8NA54 791 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 ASAP3Q8TDY4 903 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 ZNF689Q96CS4 500 aaPredicted RBP15.26■□□□□ 0.03
TPM4-202ENST00000344824 SAMD11Q96NU1 681 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 CLSTN2Q9H4D0 955 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 GPRC5CQ9NQ84 441 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 KIAA1024Q9UPX6 916 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 MTCH2Q9Y6C9 303 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 TDRD15B5MCY1 1934 aaKnown RBP15.25■□□□□ 0.03
TPM4-202ENST00000344824 BRWD1Q9NSI6 2320 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 LRRIQ4A6NIV6 560 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 INO80B-WBP1J3KQ70 363 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 ACTN4O43707 911 aaKnown RBP15.25■□□□□ 0.03
TPM4-202ENST00000344824 GPM6BQ13491 265 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 CAPSQ13938 189 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 DHX8Q14562 1220 aaKnown RBP15.25■□□□□ 0.03
TPM4-202ENST00000344824 KRBA2Q6ZNG9 492 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■■■ 40.6
TPM4-202ENST00000344824 CMTR2Q8IYT2 770 aaKnown RBP15.25■□□□□ 0.03
TPM4-202ENST00000344824 ABI1Q8IZP0 508 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 LRRC15Q8TF66 581 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 STAMQ92783 540 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 PYM1Q9BRP8 204 aaKnown RBP15.25■□□□□ 0.03
TPM4-202ENST00000344824 TNMDQ9H2S6 317 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 MINDY3Q9H8M7 445 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 IFT122Q9HBG6 1241 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 PRDM6Q9NQX0 595 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 TMEM161AQ9NX61 479 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 DBR1Q9UK59 544 aaKnown RBP15.25■□□□□ 0.03
TPM4-202ENST00000344824 RWDD3Q9Y3V2 267 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 STK24Q9Y6E0 443 aa15.25■□□□□ 0.03
TPM4-202ENST00000344824 MRPL42Q9Y6G3 142 aaKnown RBP15.25■□□□□ 0.03
TPM4-202ENST00000344824 ASAP2O43150 1006 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 LPXNO60711 386 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 AFMP43652 599 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 MXD4Q14582 209 aaPredicted RBP15.24■□□□□ 0.03
TPM4-202ENST00000344824 E2F4Q16254 413 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 TMEM119Q4V9L6 283 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 PADI6Q6TGC4 694 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 KCNK18Q7Z418 384 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 SRGAP1Q7Z6B7 1085 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 MCPH1Q8NEM0 835 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 ERCC4Q92889 916 aaPredicted RBP15.24■□□□□ 0.03
TPM4-202ENST00000344824 BHMT2Q9H2M3 363 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 HCSTQ9UBK5 93 aa15.24■□□□□ 0.03
TPM4-202ENST00000344824 E9PMD0 336 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 SSBP05455 408 aaKnown RBP eCLIP15.23■□□□□ 0.03
TPM4-202ENST00000344824 SLFN14P0C7P3 912 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 XRCC6P12956 609 aaKnown RBP eCLIP15.23■□□□□ 0.03
TPM4-202ENST00000344824 GLRA2P23416 452 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 MCM6Q14566 821 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 NAALADL2Q58DX5 795 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 ECHDC2Q86YB7 292 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 HELQQ8TDG4 1101 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 TIGD1Q96MW7 591 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 NT5C3AQ9H0P0 336 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 USP25Q9UHP3 1055 aa15.23■□□□□ 0.03
TPM4-202ENST00000344824 HOXA2O43364 376 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 MUTP22033 750 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 PNOCQ13519 176 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 HYIQ5T013 277 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 RAD54LQ92698 747 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 LPPQ93052 612 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 C11orf84Q9BUA3 381 aaPredicted RBP15.22■□□□□ 0.03
TPM4-202ENST00000344824 ELAC1Q9H777 363 aaKnown RBP15.22■□□□□ 0.03
TPM4-202ENST00000344824 POLD4Q9HCU8 107 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 CHST12Q9NRB3 414 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 BLOC1S4Q9NUP1 217 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 AGPAT5Q9NUQ2 364 aa15.22■□□□□ 0.03
TPM4-202ENST00000344824 TCF20Q9UGU0 1960 aaKnown RBP15.21■□□□□ 0.03
TPM4-202ENST00000344824 H3BNC9 293 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 SLC26A4O43511 780 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 CASP1P29466 404 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 ARL2P36404 184 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 BMPR1AP36894 532 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 RAB27AP51159 221 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 PTPROQ16827 1216 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 ZSCAN23Q3MJ62 389 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 FAM43BQ6ZT52 329 aaPredicted RBP15.21■□□□□ 0.03
TPM4-202ENST00000344824 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 CRIPAKQ8N1N5 446 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
TPM4-202ENST00000344824 PAGE5Q96GU1 130 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 CCDC34Q96HJ3 373 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 CPB2Q96IY4 423 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 BLZF1Q9H2G9 400 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 ALG13Q9NP73 1137 aaKnown RBP15.21■□□□□ 0.03
TPM4-202ENST00000344824 FAM105AQ9NUU6 356 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 THEGQ9P2T0 379 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 STK17AQ9UEE5 414 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 DNM3Q9UQ16 869 aa15.21■□□□□ 0.03
TPM4-202ENST00000344824 INPP5FQ9Y2H2 1132 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms