RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ZBTB46Q86UZ6 589 aa10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 ESR2Q92731 530 aa10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 ECSITQ9BQ95 431 aa10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 EIF2AQ9BY44 585 aaKnown RBP10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 SYNCQ9H7C4 482 aa10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 MAGEC2Q9UBF1 373 aaPredicted RBP10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 TBK1Q9UHD2 729 aa10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 DDX25Q9UHL0 483 aaKnown RBP10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 VPS51Q9UID3 782 aa10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 TBC1D30Q9Y2I9 924 aa10.33□□□□□ -0.76
PTCHD4-201ENST00000339488 A0A1W2PQC6 194 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 GRID2IPA4D2P6 1211 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 DDX3XO00571 662 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 STX2P32856 288 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 AUHQ13825 339 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 BCL2A1Q16548 175 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 SH3RF1Q7Z6J0 888 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 METTL25Q8N6Q8 603 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 ACTRT1Q8TDG2 376 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 PPP4R1Q8TF05 950 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 PRR11Q96HE9 360 aaPredicted RBP10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 CDK5RAP3Q96JB5 506 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 FNBP1Q96RU3 617 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 KLHL4Q9C0H6 718 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 PCDHGB4Q9UN71 923 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 PCDHGB5Q9Y5G0 923 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 SRPRBQ9Y5M8 271 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 MAST3O60307 1309 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 MYH4Q9Y623 1939 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 hCG_1642624A0A1W2PR95 340 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 CCDC169A6NNP5 214 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 KCNA6P17658 529 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 CPA2P48052 419 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 TFCP2Q12800 502 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 LPIN1Q14693 890 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 GSTA3Q16772 222 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 EARS2Q5JPH6 523 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 MEI1Q5TIA1 1274 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 NEPROQ6NW34 567 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 FBXO25Q8TCJ0 367 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 JDP2Q8WYK2 163 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 PGM2Q96G03 612 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 KAZALD1Q96I82 304 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.32□□□□□ -0.763e-6■□□□□ 9.9
PTCHD4-201ENST00000339488 PITPNM3Q9BZ71 974 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 TMEM59LQ9UK28 342 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 PPP1R9AQ9ULJ8 1098 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 FADS3Q9Y5Q0 445 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 SLC12A7Q9Y666 1083 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 UMODL1Q5DID0 1318 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 NBPF26B4DH59 902 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 HAUS5O94927 633 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 RGS2P41220 211 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 ENTPD1P49961 510 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 DNM2P50570 870 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 PFKPQ01813 784 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 PPIDQ08752 370 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 MTMR2Q13614 643 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 INAQ16352 499 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 NADK2Q4G0N4 442 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 RNF43Q68DV7 783 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 SHKBP1Q8TBC3 707 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 USP6NLQ92738 828 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 DDX12PQ92771 950 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 SLC39A3Q9BRY0 314 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 NOC4LQ9BVI4 516 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 SIAEQ9HAT2 523 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
PTCHD4-201ENST00000339488 FAM208AQ9UK61 1670 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 DLC1Q96QB1 1528 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 KLRF2D3W0D1 207 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 RASGRF2O14827 1237 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 ATMINO43313 823 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 ZBTB11O95625 1053 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 SLC5A2P31639 672 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 TCF7P36402 384 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 EIF3BP55884 814 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 PTK7Q13308 1070 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 CCSAPQ6IQ19 270 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 RALYLQ86SE5 291 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 BPHLQ86WA6 291 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 ZBED8Q8IZ13 594 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 SYT2Q8N9I0 419 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 CNOT6LQ96LI5 555 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 SH3GL1Q99961 368 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 ZFYVE28Q9HCC9 887 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 CCPG1Q9ULG6 757 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 HBS1LQ9Y450 684 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 TBX22Q9Y458 520 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 TMEM94Q12767 1356 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 ACSL3O95573 720 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 AGTP01019 485 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 LMNAP02545 664 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 GYS1P13807 737 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 DLG1Q12959 904 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 ATP1A4Q13733 1029 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 RPS6KA1Q15418 735 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 TGFBIQ15582 683 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms