RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 LAMTOR5O43504 91 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 H2AFYO75367 372 aaKnown RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 PRKAR2AP13861 404 aaKnown RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 HTR1BP28222 390 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 HALP42357 657 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 ATP1A2P50993 1020 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 OR6B2Q6IFH4 312 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 ZNF654Q8IZM8 581 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 DDX1Q92499 740 aaKnown RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 ATOH1Q92858 354 aaPredicted RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 DNAJC1Q96KC8 554 aaKnown RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 GAD1Q99259 594 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 NELL2Q99435 816 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 DBNDD2Q9BQY9 259 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 TAF1DQ9H5J8 278 aaPredicted RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 EXO5Q9H790 373 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 GPRC5DQ9NZD1 345 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 DDX41Q9UJV9 622 aaKnown RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 TPX2Q9ULW0 747 aaKnown RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 SYNPO2Q9UMS6 1093 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 MAGED2Q9UNF1 606 aaPredicted RBP4.09□□□□□ -1.76
KNTC1-201ENST00000333479 PCDHGB3Q9Y5G1 929 aa4.09□□□□□ -1.76
KNTC1-201ENST00000333479 RIC1Q4ADV7 1423 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 PER1O15534 1290 aaPredicted RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CUTAO60888 179 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 PPP6R2O75170 966 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 AP1G2O75843 785 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 PMLP29590 882 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CLK3P49761 638 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 THOP1P52888 689 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 RPS6KA2Q15349 733 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 MGAT5BQ3V5L5 792 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 MAEAQ7L5Y9 396 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ANKLE1Q8NAG6 615 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 SPIRE2Q8WWL2 714 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 SLC9A7Q96T83 725 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 DNAJC17Q9NVM6 304 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 HDAC6Q9UBN7 1215 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 VPS9D1Q9Y2B5 631 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CRYL1Q9Y2S2 319 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 MRPS23Q9Y3D9 190 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 USP32Q8NFA0 1604 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ITSN1Q15811 1721 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 A0A087WZ62 844 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 TMEM110-MUSTN1A8MSY1 372 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 PRPSAP2O60256 369 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 GLUD1P00367 558 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ITGB6P18564 788 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 MAP4P27816 1152 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 LONP1P36776 959 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 RENBPP51606 427 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CTDSPL2Q05D32 466 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 HLTFQ14527 1009 aaKnown RBP eCLIP4.08□□□□□ -1.764e-6■□□□□ 10.5
KNTC1-201ENST00000333479 TRIP10Q15642 601 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 TAF1BQ53T94 588 aaPredicted RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CNGA4Q8IV77 575 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ACRBPQ8NEB7 543 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 LRRC37BQ96QE4 947 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ZBTB18Q99592 522 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 FBXO10Q9UK96 956 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 KIF1AQ12756 1690 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ARHGAP42A6NI28 874 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 GPR25O00155 361 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ZBED1O96006 694 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ADH1CP00326 375 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 HIST1H2AGP0C0S8 130 aaPredicted RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CTSEP14091 401 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 HIST1H2ADP20671 130 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CALRP27797 417 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 MDM2Q00987 491 aaPredicted RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 GRSF1Q12849 480 aaKnown RBP eCLIP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CDH18Q13634 790 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 AASDHQ4L235 1098 aaPredicted RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 FAM47AQ5JRC9 791 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 SLC7A14Q8TBB6 771 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 SUCLG2Q96I99 432 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 HIST1H2AHQ96KK5 128 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 MYCBPQ99417 103 aaPredicted RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 HIST1H2AJQ99878 128 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 H2AFJQ9BTM1 129 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 NOC4LQ9BVI4 516 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 NEK6Q9HC98 313 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 NMRK2Q9NPI5 230 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 PRDM10Q9NQV6 1147 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 ASAH2Q9NR71 780 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 PCDHB4Q9Y5E5 795 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 NFATC1O95644 943 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CYP2A6P11509 494 aaPredicted RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 MYL4P12829 197 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 PSMC2P35998 433 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 SNRPFP62306 86 aaKnown RBP4.08□□□□□ -1.76
KNTC1-201ENST00000333479 TCEA2Q15560 299 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CCDC6Q16204 474 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 CTXN3Q4LDR2 81 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 HLA-DQA1Q5Y7H0 255 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 IDI2Q9BXS1 227 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 FOXP3Q9BZS1 431 aa4.08□□□□□ -1.76
KNTC1-201ENST00000333479 PLEKHA5Q9HAU0 1116 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms