RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 KAT6AQ92794 2004 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 MBLAC1A4D2B0 266 aaPredicted RBP25.45■■□□□ 1.66
TSEN54-201ENST00000333213 RRN3P2A6NIE6 340 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 VTNP04004 478 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 GRK4P32298 578 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 PRMT2P55345 433 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 MYBPC2Q14324 1141 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 FRMD5Q7Z6J6 570 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 SLAIN1Q8ND83 568 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 KCNF1Q9H3M0 494 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 NDST4Q9H3R1 872 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 IFT122Q9HBG6 1241 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 HDAC6Q9UBN7 1215 aa25.45■■□□□ 1.66
TSEN54-201ENST00000333213 SLC16A3O15427 465 aaKnown RBP25.44■■□□□ 1.66
TSEN54-201ENST00000333213 SNRPFP62306 86 aaKnown RBP25.44■■□□□ 1.66
TSEN54-201ENST00000333213 ZNF200P98182 395 aaPredicted RBP25.44■■□□□ 1.66
TSEN54-201ENST00000333213 SPECC1LQ69YQ0 1117 aa25.44■■□□□ 1.66
TSEN54-201ENST00000333213 PPP1R16BQ96T49 567 aa25.44■■□□□ 1.66
TSEN54-201ENST00000333213 KATNAL1Q9BW62 490 aa25.44■■□□□ 1.66
TSEN54-201ENST00000333213 MINDY3Q9H8M7 445 aa25.44■■□□□ 1.66
TSEN54-201ENST00000333213 SPC25Q9HBM1 224 aa25.44■■□□□ 1.66
TSEN54-201ENST00000333213 HSPBP1Q9NZL4 362 aa25.44■■□□□ 1.66
TSEN54-201ENST00000333213 CGNQ9P2M7 1197 aaKnown RBP25.44■■□□□ 1.66
TSEN54-201ENST00000333213 PHLPP2Q6ZVD8 1323 aa25.44■■□□□ 1.66
TSEN54-201ENST00000333213 PES1O00541 588 aaKnown RBP25.43■■□□□ 1.66
TSEN54-201ENST00000333213 HNRNPDLO14979 420 aaKnown RBP25.43■■□□□ 1.66
TSEN54-201ENST00000333213 MSCO60682 206 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 HOXC8P31273 242 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 TBX2Q13207 712 aaPredicted RBP25.43■■□□□ 1.66
TSEN54-201ENST00000333213 ARMCX5Q6P1M9 558 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 CCDC155Q8N6L0 562 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 MTG1Q9BT17 334 aaPredicted RBP25.43■■□□□ 1.66
TSEN54-201ENST00000333213 ARMCX3Q9UH62 379 aaPredicted RBP25.43■■□□□ 1.66
TSEN54-201ENST00000333213 ASAP2O43150 1006 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 EXOC3O60645 756 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 KPNA6O60684 536 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 IQCF3P0C7M6 154 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 ABCD1P33897 745 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 PSMC2P35998 433 aaKnown RBP25.43■■□□□ 1.66
TSEN54-201ENST00000333213 PTENP60484 403 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 STRN3Q13033 797 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 RDH13Q8NBN7 331 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 MKNK1Q9BUB5 465 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 HAPLN2Q9GZV7 340 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 IMPACTQ9P2X3 320 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 AKT3Q9Y243 479 aa25.43■■□□□ 1.66
TSEN54-201ENST00000333213 SCN10AQ9Y5Y9 1956 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 TREHO43280 583 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 PIGRP01833 764 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 ASGR1P07306 291 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 EPB41P11171 864 aaKnown RBP25.42■■□□□ 1.66
TSEN54-201ENST00000333213 SCP2P22307 547 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 TMOD1P28289 359 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 KCNA10Q16322 511 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 RUFY4Q6ZNE9 571 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 FAM186BQ8IYM0 893 aa25.42■■□□□ 1.66
TSEN54-201ENST00000333213 TARS2Q9BW92 718 aaKnown RBP25.42■■□□□ 1.66
TSEN54-201ENST00000333213 A0A087WZ62 844 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 CST5P28325 142 aaPredicted RBP25.41■■□□□ 1.66
TSEN54-201ENST00000333213 EFNA5P52803 228 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 LHX8Q68G74 356 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 SH3TC2Q8TF17 1288 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 BICD1Q96G01 975 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 ZBTB45Q96K62 511 aaPredicted RBP25.41■■□□□ 1.66
TSEN54-201ENST00000333213 FDXACB1Q9BRP7 624 aaPredicted RBP25.41■■□□□ 1.66
TSEN54-201ENST00000333213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.41■■□□□ 1.66
TSEN54-201ENST00000333213 RBAK-RBAKDNI3L0D1 243 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 CSDE1O75534 798 aaKnown RBP25.41■■□□□ 1.66
TSEN54-201ENST00000333213 MYCNP04198 464 aaPredicted RBP25.41■■□□□ 1.66
TSEN54-201ENST00000333213 KLK7P49862 253 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 TFDP1Q14186 410 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 XXYLT1Q8NBI6 393 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 NFKBIZQ9BYH8 718 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 STYXL1Q9Y6J8 313 aa25.41■■□□□ 1.66
TSEN54-201ENST00000333213 TRIP12Q14669 1992 aaPredicted RBP25.4■■□□□ 1.66
TSEN54-201ENST00000333213 GOLGA8IPA6NC78 632 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 GOLGA8JA6NMD2 632 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 LIG4P49917 911 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 MBTD1Q05BQ5 628 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 GOLGA8FQ08AF8 430 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 GOLGA8DPQ0D2H9 430 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 NBPF20Q3BBV1 942 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 CACTINQ8WUQ7 758 aaKnown RBP25.4■■□□□ 1.66
TSEN54-201ENST00000333213 SLC35C1Q96A29 364 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 SAAL1Q96ER3 474 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 FZD8Q9H461 694 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 METTL14Q9HCE5 456 aaKnown RBP25.4■■□□□ 1.66
TSEN54-201ENST00000333213 FRMD4BQ9Y2L6 1034 aa25.4■■□□□ 1.66
TSEN54-201ENST00000333213 A0A1W2PQC6 194 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 GPC3P51654 580 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 POU5F1BQ06416 359 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 ZBTB8OSQ8IWT0 167 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 C7orf31Q8N865 590 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 POMGNT1Q8WZA1 660 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 FAM49AQ9H0Q0 323 aaPredicted RBP25.39■■□□□ 1.66
TSEN54-201ENST00000333213 C2orf40Q9H1Z8 148 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 HMX1Q9NP08 348 aaPredicted RBP25.39■■□□□ 1.66
TSEN54-201ENST00000333213 GRIN2DO15399 1336 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 ITIH6Q6UXX5 1313 aa25.39■■□□□ 1.66
TSEN54-201ENST00000333213 CYP2C9P11712 490 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms