RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TCHPQ9BT92 498 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CYP4F11Q9HBI6 524 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 UBN1Q9NPG3 1134 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 BATF3Q9NR55 127 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 TMOD2Q9NZR1 351 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 RNF181Q9P0P0 153 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CTNNAL1Q9UBT7 734 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 MARCOQ9UEW3 520 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 LRRC37A3O60309 1634 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 COL22A1Q8NFW1 1626 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ITGB4P16144 1822 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CLRN2A0PK11 232 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 F8VZ95 297 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CLDN3O15551 220 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ORC4O43929 436 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 DNAJC6O75061 913 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 SNUPNO95149 360 aaKnown RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 FTLP02792 175 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 LMNB1P20700 586 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CCND1P24385 295 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 RFC5P40937 340 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ATXN3P54252 364 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 MAP7Q14244 749 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 SLMAPQ14BN4 828 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 OLFML2BQ68BL8 750 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 TTBK2Q6IQ55 1244 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 BZW1Q7L1Q6 419 aaKnown RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 PALM2Q8IXS6 379 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 IQCKQ8N0W5 287 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 KIAA0895Q8NCT3 520 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 FAM129AQ9BZQ8 928 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 DCP1AQ9NPI6 582 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 PPARGC1AQ9UBK2 798 aaKnown RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ZNF711Q9Y462 761 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 NKRFO15226 690 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 GCLMP48507 274 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 USP11P51784 963 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 KDSRQ06136 332 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 CTTNQ14247 550 aaKnown RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 BBS9Q3SYG4 887 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 DCUN1D2Q6PH85 259 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SLC30A10Q6XR72 485 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 APTXQ7Z2E3 356 aaKnown RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 PASD1Q8IV76 773 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 TRIM59Q8IWR1 403 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 GBP7Q8N8V2 638 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 RNF25Q96BH1 459 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 DDX50Q9BQ39 737 aaKnown RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SHCBP1LQ9BZQ2 653 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 NEUROG2Q9H2A3 272 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 BZW2Q9Y6E2 419 aaKnown RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 ABCC6O95255 1503 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 FOXP2O15409 715 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SHOX2O60902 331 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 MAPK4P31152 587 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 HOXA13P31271 388 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 HSPA9P38646 679 aaKnown RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 PSMC4P43686 418 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 YWHAGP61981 247 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 CLUL1Q15846 466 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 IL17AQ16552 155 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 AGBL2Q5U5Z8 902 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 LRIG3Q6UXM1 1119 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 RNF207Q6ZRF8 634 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 ADGRA1Q86SQ6 560 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 ANKMY2Q8IV38 441 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 NIM1KQ8IY84 436 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SLC30A5Q8TAD4 765 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 RAD54LQ92698 747 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 TATDN2Q93075 761 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 ERP44Q9BS26 406 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 VCX3BQ9H321 246 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 ANLNQ9NQW6 1124 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 STOML1Q9UBI4 398 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 PCDHA1Q9Y5I3 950 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 BTAF1O14981 1849 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SCN11AQ9UI33 1791 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SSU72P8A0A1W2PR75 194 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 I3L4J1 428 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 K7ENM7 598 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 CBX6O95503 412 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 RWDD2BP57060 319 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SEPT2Q15019 361 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 RCN1Q15293 331 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SPRED3Q2MJR0 410 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 EPC2Q52LR7 807 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 WDR78Q5VTH9 848 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 ZNF571Q7Z3V5 609 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-201ENST00000317716 OGFOD1Q8N543 542 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 SLITRK6Q9H5Y7 841 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 STK17AQ9UEE5 414 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 NAGPAQ9UK23 515 aa8.06□□□□□ -1.12
CDHR3-201ENST00000317716 NWD2Q9ULI1 1742 aa8.05□□□□□ -1.12
CDHR3-201ENST00000317716 MRC1P22897 1456 aa8.05□□□□□ -1.12
CDHR3-201ENST00000317716 PI4K2BG5E9Z4 385 aa8.05□□□□□ -1.12
CDHR3-201ENST00000317716 SGK1O00141 431 aa8.05□□□□□ -1.12
CDHR3-201ENST00000317716 NVLO15381 856 aaKnown RBP8.05□□□□□ -1.12
CDHR3-201ENST00000317716 CREB3O43889 395 aa8.05□□□□□ -1.12
CDHR3-201ENST00000317716 KRT16P08779 473 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms