RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 ACTN3Q08043 901 aaPredicted RBP11.81□□□□□ -0.52
VWA3A-201ENST00000299840 CUL3Q13618 768 aa11.81□□□□□ -0.52
VWA3A-201ENST00000299840 ENOX2Q16206 610 aaKnown RBP11.81□□□□□ -0.52
VWA3A-201ENST00000299840 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
VWA3A-201ENST00000299840 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
VWA3A-201ENST00000299840 MYO1HQ8N1T3 1032 aa11.81□□□□□ -0.52
VWA3A-201ENST00000299840 ZFAND2BQ8WV99 257 aa11.81□□□□□ -0.52
VWA3A-201ENST00000299840 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
VWA3A-201ENST00000299840 TANC1Q9C0D5 1861 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 MKI67P46013 3256 aaKnown RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 H3BRB1 525 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TBX3O15119 743 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TDP2O95551 362 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 ZNF286BP0CG31 522 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 BDNFP23560 247 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 ACTR2P61160 394 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 KRT76Q01546 638 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 CLPPQ16740 277 aaPredicted RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 INTS4Q96HW7 963 aaKnown RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TUT1Q9H6E5 874 aaKnown RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 PKD2L1Q9P0L9 805 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 GTF2IRD1Q9UHL9 959 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TRIM43BA6NCK2 446 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TMEM221A6NGB7 291 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 B4GALT4O60513 344 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 GJB2P29033 226 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 BMP8BP34820 402 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 CUL4BQ13620 913 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 PKP1Q13835 747 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 ABHD15Q6UXT9 468 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 PLPPR4Q7Z2D5 763 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 CCDC170Q8IYT3 715 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 CNNM3Q8NE01 707 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 ETNPPLQ8TBG4 499 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 MAGEC3Q8TD91 643 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 WHAMMQ8TF30 809 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 CCDC47Q96A33 483 aaKnown RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TRIM43Q96BQ3 446 aaPredicted RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 PCYT2Q99447 389 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 SLC7A5P2Q9GIP4 190 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 PRO3102Q9H379 93 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 SMARCAD1Q9H4L7 1026 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 METTL14Q9HCE5 456 aaKnown RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 TMEM39AQ9NV64 488 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 EXOC1Q9NV70 894 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
VWA3A-201ENST00000299840 DDX25Q9UHL0 483 aaKnown RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 ZMYND8Q9ULU4 1186 aaPredicted RBP11.8□□□□□ -0.52
VWA3A-201ENST00000299840 PSMD10O75832 226 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 FSBPO95073 299 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 CCNE2O96020 404 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 DESP17661 470 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 CLCN2P51788 898 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
VWA3A-201ENST00000299840 ORC2Q13416 577 aaPredicted RBP11.79□□□□□ -0.52
VWA3A-201ENST00000299840 LETM2Q2VYF4 491 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 B3GNT9Q6UX72 402 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 SH3RF1Q7Z6J0 888 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 TRIM58Q8NG06 486 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 AFAP1L1Q8TED9 768 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 USP33Q8TEY7 942 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 FAM20AQ96MK3 541 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 GDF15Q99988 308 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.79□□□□□ -0.52
VWA3A-201ENST00000299840 KCNMB3Q9NPA1 279 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
VWA3A-201ENST00000299840 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 TIMP1P01033 207 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 RPSAP08865 295 aaKnown RBP11.79□□□□□ -0.52
VWA3A-201ENST00000299840 FOSBP53539 338 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 GUCY1B3Q02153 619 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 DRC7Q8IY82 874 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 PEX5LQ8IYB4 626 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 C7orf31Q8N865 590 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 RDM1Q8NG50 284 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 FAM76AQ8TAV0 307 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 CLIP3Q96DZ5 547 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 TEKT3Q9BXF9 490 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 TRPV6Q9H1D0 765 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 CORO1CQ9ULV4 474 aaPredicted RBP11.79□□□□□ -0.52
VWA3A-201ENST00000299840 SPO11Q9Y5K1 396 aa11.79□□□□□ -0.52
VWA3A-201ENST00000299840 BOLA2-SMG1P6H3BVE0 249 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 SLC26A2P50443 739 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 RBL2Q08999 1139 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 CCDC50Q8IVM0 306 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 TSC22D3Q99576 134 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 ERAP1Q9NZ08 941 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 TUBGCP4Q9UGJ1 667 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 FAN1Q9Y2M0 1017 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 EVPLQ92817 2033 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
VWA3A-201ENST00000299840 SLC37A4O43826 429 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 SMNDC1O75940 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
VWA3A-201ENST00000299840 GNAT1P11488 350 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 SYN1P17600 705 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 SFNP31947 248 aa11.78□□□□□ -0.52
VWA3A-201ENST00000299840 TRAPPC10P48553 1259 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms