RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 RSPH10B2B2RC85 870 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 RSPH10BP0C881 870 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 RALBP11234 206 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 TFDP2Q14188 446 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 LBRQ14739 615 aaKnown RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 ATP11CQ8NB49 1132 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 MTERF3Q96E29 417 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 BTBD18B2RXH4 712 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 MTRF1O75570 445 aaKnown RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 FGAP02671 866 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 HSPA13P48723 471 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 SEMA3FQ13275 785 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 SARM1Q6SZW1 724 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 TRIM13O60858 407 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 KCTD2Q14681 263 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 FBXO31Q5XUX0 539 aaPredicted RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 SUCLG2Q96I99 432 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 CEP170P1Q96L14 293 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 FNDC3AQ9Y2H6 1198 aaKnown RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 CCND1P24385 295 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 TSPY1Q01534 308 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 BBS2Q9BXC9 721 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 TMEM161AQ9NX61 479 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 SRPRBQ9Y5M8 271 aaKnown RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 SYDE1Q6ZW31 735 aaPredicted RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 TAF1DQ9H5J8 278 aaPredicted RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 SPTLC3Q9NUV7 552 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 NXF1Q9UBU9 619 aaKnown RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 ITGB1BP2Q9UKP3 347 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 MAP3K13O43283 966 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 GNAT1P11488 350 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 EYA1Q99502 592 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 PPCSQ9HAB8 311 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 GPATCH8Q9UKJ3 1502 aaKnown RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 PNMA6EA0A0J9YXQ4 647 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 GCP02774 474 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 PSMC6P62333 389 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 SLFN13Q68D06 897 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 CMTR1Q8N1G2 835 aaKnown RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 WWP1Q9H0M0 922 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 GPC5P78333 572 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 ARHGAP17Q68EM7 881 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 MFN1Q8IWA4 741 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 ACRBPQ8NEB7 543 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 RSPH1Q8WYR4 309 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 ZWILCHQ9H900 591 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 PCDHA5Q9Y5H7 936 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 K7ERI5 159 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 TNFAIP2Q03169 654 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 CSTF3Q12996 717 aaKnown RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 CEP72Q9P209 647 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 MORC2Q9Y6X9 1032 aaPredicted RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 SHANK2Q9UPX8 1470 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 PI4K2BG5E9Z4 385 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 STRNO43815 780 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 CHRNA3P32297 505 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 HSPA9P38646 679 aaKnown RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 SF3B3Q15393 1217 aaKnown RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 ARMCX4Q5H9R4 360 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 OR6B2Q6IFH4 312 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 PCYOX1LQ8NBM8 494 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 IL1RAPL1Q9NZN1 696 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 H2AFY2Q9P0M6 372 aaPredicted RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 INPP5FQ9Y2H2 1132 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 MMP1P03956 469 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 KPNB1Q14974 876 aaKnown RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 CCT7Q99832 543 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 PDE5AO76074 875 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 MLH1P40692 756 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 NDST4Q9H3R1 872 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 KRCC1Q9NPI7 259 aaPredicted RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 SH3GLB2Q9NR46 395 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 CFAP69A5D8W1 941 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 DHX34Q14147 1143 aaKnown RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 CDO1Q16878 200 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 RABGAP1LQ5R372 815 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 FASTKD5Q7L8L6 764 aaKnown RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 UVRAGQ9P2Y5 699 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.8□□□□□ -0.36
SRRM4-201ENST00000267260 MLH3Q9UHC1 1453 aa12.8□□□□□ -0.36
SRRM4-201ENST00000267260 ABCC2Q92887 1545 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 COG1Q8WTW3 980 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 PDP2Q9P2J9 529 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 IP6K2Q9UHH9 426 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 PFASO15067 1338 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 C5orf58C9J3I9 102 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 PALMO75781 387 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 APOA4P06727 396 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 GTF2IP78347 998 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms