RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 EHD2Q9NZN4 543 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 DDAH1O94760 285 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 MYO1EQ12965 1108 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 UBE3CQ15386 1083 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 MAN2A1Q16706 1144 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 TMEM179Q6ZVK1 233 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 AURKCQ9UQB9 309 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 PCDHA5Q9Y5H7 936 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 ADGBQ8N7X0 1667 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 CCDC85CA6NKD9 419 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 C6orf222P0C671 652 aaPredicted RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 GGCXP38435 758 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 RASSF3Q86WH2 238 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 RFWD2Q8NHY2 731 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 AGR3Q8TD06 166 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 PHF21AQ96BD5 680 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 THAP11Q96EK4 314 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 RPAP3Q9H6T3 665 aaPredicted RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 MRPL40Q9NQ50 206 aaKnown RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 H0Y626 953 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 TRIM16O95361 564 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 FGGP02679 453 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 SERPINB10P48595 397 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 PAPOLAP51003 745 aaKnown RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 COL23A1Q86Y22 540 aaPredicted RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 DEAF1O75398 565 aaPredicted RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 MAP4P27816 1152 aaKnown RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 PPARGP37231 505 aaPredicted RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 CCDC142Q17RM4 750 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 ARHGAP18Q8N392 663 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 WDR48Q8TAF3 677 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 RNF139Q8WU17 664 aa13.67□□□□□ -0.22
TTC39A-202ENST00000262676 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 AFF4Q9UHB7 1163 aaKnown RBP13.67□□□□□ -0.22
TTC39A-202ENST00000262676 KPNA7A9QM74 516 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 CTSHP09668 335 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 PNMA6AP0CW24 399 aaPredicted RBP13.66□□□□□ -0.22
TTC39A-202ENST00000262676 PSMA2P25787 234 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 GRIN1Q05586 938 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 CUL1Q13616 776 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 HPS4Q9NQG7 708 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 SNX24Q9Y343 169 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 CCDC151A5D8V7 595 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 KRT37O76014 449 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 ADD2P35612 726 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 SCRN1Q12765 414 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 ZNF658Q5TYW1 1059 aaPredicted RBP13.66□□□□□ -0.22
TTC39A-202ENST00000262676 LVRNQ6Q4G3 990 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 ULK4Q96C45 1275 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 VPS39Q96JC1 886 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 TMCC1O94876 653 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 CYP27A1Q02318 531 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 FAM160B2Q86V87 743 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 GAS2L3Q86XJ1 694 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 RUBCNLQ9H714 662 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 COPRSQ9NQ92 184 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 SAMSN1Q9NSI8 373 aaKnown RBP13.66□□□□□ -0.22
TTC39A-202ENST00000262676 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 CUL3Q13618 768 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 LRRC14Q15048 493 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 RNF135Q8IUD6 432 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 DHTKD1Q96HY7 919 aaPredicted RBP13.66□□□□□ -0.22
TTC39A-202ENST00000262676 TGS1Q96RS0 853 aaKnown RBP13.66□□□□□ -0.22
TTC39A-202ENST00000262676 HEMGNQ9BXL5 484 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 ZCWPW1Q9H0M4 648 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 RNF146Q9NTX7 359 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 TECPR2O15040 1411 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 KRT17Q04695 432 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 SNAPC2Q13487 334 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 MAP1SQ66K74 1059 aaPredicted RBP13.66□□□□□ -0.22
TTC39A-202ENST00000262676 HDDC2Q7Z4H3 204 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 ZNF212Q9UDV6 495 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 MED23Q9ULK4 1368 aa13.66□□□□□ -0.22
TTC39A-202ENST00000262676 STXBP2Q15833 593 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 RRM2BQ7LG56 351 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 MKL2Q9ULH7 1088 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 GNAT1P11488 350 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 SLC9A1P19634 815 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 DDIASQ8IXT1 998 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 SLC13A1Q9BZW2 595 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 GOLGA8IPA6NC78 632 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 GOLGA8JA6NMD2 632 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 NDUFA10O95299 355 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 ATN1P54259 1190 aaPredicted RBP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 NDUFAF2Q8N183 169 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 IFT43Q96FT9 208 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 TRIM45Q9H8W5 580 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms