RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Pacsin1Q61644 441 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Armcx2Q6A058 784 aaKnown RBP10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 TbataQ7TSD4 393 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Mrgprx1Q8CIP3 322 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Chordc1Q9D1P4 331 aaKnown RBP10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Casq2O09161 415 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 MycP01108 439 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Map4k1P70218 827 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Mark2Q05512 776 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Ric8bQ80XE1 520 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Trip10Q8CJ53 603 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Zswim7Q9CWQ2 152 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Znf608Q56A10 1511 aa10.43□□□□□ -0.74
Syne1-201ENSMUST00000041639 Apol11bE9PUZ0 337 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 CstaP56567 97 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Cdo1P60334 200 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Pbxip1Q3TVI8 727 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Gm13103Q4VAD2 491 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 ChiaQ91XA9 473 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Smyd3Q9CWR2 428 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Myo1hQ9D6A1 958 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Nr1h3Q9Z0Y9 445 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 C87977A2A958 498 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Supt3B0QZW4 406 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Patl1Q3TC46 770 aaKnown RBP10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Szrd1Q6NXN1 152 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Zfp418Q8BFS8 652 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Slc25a24Q8BMD8 475 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Rcan1Q9JHG6 198 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Pard6bQ9JK83 371 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Atp11cQ9QZW0 1129 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 AK157302I3ITR1 129 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Cdc25aP48964 514 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Hif1aQ61221 836 aaKnown RBP10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Lrrc8eQ66JT1 795 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Nlrp4eQ66X19 978 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Dnajc6Q80TZ3 938 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Psmd5Q8BJY1 504 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Fbxo44Q8BK26 255 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Isca1Q9D924 129 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Cyp2s1Q9DBX6 501 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Mucl2P02815 138 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Gjb4Q02738 266 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Col6a1Q04857 1025 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Pum3Q8BKS9 647 aaKnown RBP10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Armc6Q8BNU0 468 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Daam1Q8BPM0 1077 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Gprasp2Q8BUY8 826 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Dppa3Q8QZY3 150 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Ltb4r2Q9JJL9 360 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Adrm1Q9JKV1 407 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 GgcxQ9QYC7 757 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Rnf123Q5XPI3 1314 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Simc1E9Q6E9 1354 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Faf1P54731 649 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Vwa3aQ3UVV9 1148 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Serpinb6dQ3UWK8 375 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Fam92bQ3V2J0 292 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 LnpkQ7TQ95 425 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Vps39Q8R5L3 886 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Polr3fQ921X6 316 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Vps33aQ9D2N9 598 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Hebp1Q9R257 190 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Apobec2Q9WV35 224 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Krt1P04104 637 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Abcb1bP06795 1276 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Kcna1P16388 495 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 GmncQ3URY2 333 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Ddx42Q810A7 929 aaKnown RBP10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Tigd4Q8BUZ3 513 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Sulf1Q8K007 870 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Bbs7Q8K2G4 715 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Mageb16Q9CWV4 363 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Tmem192Q9CXT7 266 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Rbp7Q9EPC5 134 aa10.42□□□□□ -0.74
Syne1-201ENSMUST00000041639 Rabgap1lA6H6A9 815 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Lzts1P60853 599 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Ttbk2Q3UVR3 1243 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Cyfip2Q5SQX6 1253 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Dsg1aQ61495 1057 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Ipo11Q8K2V6 975 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 PccaQ91ZA3 724 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Cul7Q8VE73 1689 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Herc3A6H6S0 1050 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 OatP29758 439 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Grin1P35438 938 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 PpargP37238 505 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Oog4Q4G0C7 502 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Ino80dQ66JY2 873 aaKnown RBP10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Nlrp9bQ66X22 1003 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Ago2Q8CJG0 860 aaKnown RBP10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Tbc1d22aQ8R5A6 516 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Tmem206Q9D771 350 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Cdk12Q14AX6 1484 aaKnown RBP10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Impdh2P24547 514 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Atxn10P28658 475 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Afap1l2Q5DTU0 825 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Acot5Q6Q2Z6 421 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 Ttc7aQ8BGB2 858 aa10.41□□□□□ -0.74
Syne1-201ENSMUST00000041639 IkbipQ9DBZ1 373 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms