RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR60, Length 104 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR60	snR60	INH1	P01097	85 aa		0.58	□□□□□ -2.32
snR60	snR60	CBP2	P03874	630 aa	Predicted RBP	0.58	□□□□□ -2.32
snR60	snR60	YGR266W	P53326	701 aa		0.58	□□□□□ -2.32
snR60	snR60	OSH6	Q02201	448 aa		0.58	□□□□□ -2.32
snR60	snR60	RDS3	Q06835	107 aa	Predicted RBP	0.58	□□□□□ -2.32
snR60	snR60	APC5	Q08683	685 aa		0.58	□□□□□ -2.32
snR60	snR60	PRR2	Q12310	699 aa		0.58	□□□□□ -2.32
snR60	snR60	ISA2	Q12425	185 aa		0.58	□□□□□ -2.32
snR60	snR60	PFK27	Q12471	397 aa	Predicted RBP	0.58	□□□□□ -2.32
snR60	snR60	REP1	P03871	373 aa		0.57	□□□□□ -2.32
snR60	snR60	DPM1	P14020	267 aa	Known RBP	0.57	□□□□□ -2.32
snR60	snR60	CKI1	P20485	582 aa		0.57	□□□□□ -2.32
snR60	snR60	RRT12	P25381	491 aa		0.57	□□□□□ -2.32
snR60	snR60	RPN12	P32496	274 aa		0.57	□□□□□ -2.32
snR60	snR60	MPE1	P35728	441 aa	Known RBP	0.57	□□□□□ -2.32
snR60	snR60	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.57	□□□□□ -2.32	not detected
snR60	snR60	FYV8	P46949	817 aa	Known RBP	0.57	□□□□□ -2.32
snR60	snR60	YJL027C	P47063	138 aa	Predicted RBP	0.57	□□□□□ -2.32
snR60	snR60	YJR141W	P47172	347 aa	Predicted RBP	0.57	□□□□□ -2.32
snR60	snR60	MIG2	P53035	382 aa		0.57	□□□□□ -2.32
snR60	snR60	EBS1	Q03466	884 aa	Known RBP	0.57	□□□□□ -2.32
snR60	snR60	MRX9	Q07349	420 aa	Known RBP	0.57	□□□□□ -2.32
snR60	snR60	PEX27	Q08580	376 aa		0.57	□□□□□ -2.32
snR60	snR60	SPE3	Q12074	293 aa	Known RBP	0.57	□□□□□ -2.32
snR60	snR60	RAD1	P06777	1100 aa		0.56	□□□□□ -2.32
snR60	snR60	UTR1	P21373	530 aa		0.56	□□□□□ -2.32
snR60	snR60	DCC1	P25559	380 aa		0.56	□□□□□ -2.32
snR60	snR60	KTI12	P34253	313 aa	Known RBP	0.56	□□□□□ -2.32
snR60	snR60	YBL028C	P38202	106 aa		0.56	□□□□□ -2.32
snR60	snR60	TRM7	P38238	310 aa	Known RBP	0.56	□□□□□ -2.32
snR60	snR60	MMS21	P38632	267 aa		0.56	□□□□□ -2.32
snR60	snR60	COS6	P53344	381 aa		0.56	□□□□□ -2.32
snR60	snR60	YNR066C	P53752	436 aa		0.56	□□□□□ -2.32
snR60	snR60	NAT4	Q04751	285 aa		0.56	□□□□□ -2.32
snR60	snR60	SUE1	Q06524	206 aa		0.56	□□□□□ -2.32
snR60	snR60	DTD1	Q07648	150 aa	Known RBP	0.56	□□□□□ -2.32
snR60	snR60	RTC5	Q12108	567 aa	Known RBP	0.56	□□□□□ -2.32
snR60	snR60	YPL245W	Q12179	454 aa	Known RBP	0.56	□□□□□ -2.32
snR60	snR60	VPS1	P21576	704 aa	Known RBP	0.55	□□□□□ -2.32
snR60	snR60	MXR2	P25566	168 aa		0.55	□□□□□ -2.32
snR60	snR60	SUR1	P33300	382 aa		0.55	□□□□□ -2.32
snR60	snR60	AIM29	P36154	155 aa		0.55	□□□□□ -2.32
snR60	snR60	PEX32	P38292	413 aa		0.55	□□□□□ -2.32
snR60	snR60	SYS1	P41544	203 aa		0.55	□□□□□ -2.32
snR60	snR60	MND1	P53102	219 aa		0.55	□□□□□ -2.32
snR60	snR60	MPS2	P53159	387 aa		0.55	□□□□□ -2.32
snR60	snR60	SPO77	Q06134	477 aa		0.55	□□□□□ -2.32
snR60	snR60	CTS2	Q06350	511 aa		0.55	□□□□□ -2.32
snR60	snR60	YFH1	Q07540	174 aa		0.55	□□□□□ -2.32
snR60	snR60	YHR045W	P38775	560 aa		0.54	□□□□□ -2.32
snR60	snR60	SNL1	P40548	159 aa		0.54	□□□□□ -2.32
snR60	snR60	LIF1	P53150	421 aa		0.54	□□□□□ -2.32
snR60	snR60	BIO4	P53630	237 aa		0.54	□□□□□ -2.32
snR60	snR60	ALG9	P53868	555 aa	Known RBP	0.54	□□□□□ -2.32
snR60	snR60	GYL1	Q04322	720 aa		0.54	□□□□□ -2.32
snR60	snR60	RDL2	Q08742	149 aa	Known RBP	0.54	□□□□□ -2.32
snR60	snR60	YPL150W	Q12152	901 aa		0.54	□□□□□ -2.32
snR60	snR60	EMC6	Q12431	108 aa		0.54	□□□□□ -2.32
snR60	snR60	AGC1	Q12482	902 aa		0.54	□□□□□ -2.32
snR60	snR60	YAL063C-A	Q3E791	96 aa		0.54	□□□□□ -2.32
snR60	snR60	JNM1	P36224	373 aa		0.53	□□□□□ -2.32
snR60	snR60	PET8	P38921	284 aa		0.53	□□□□□ -2.32
snR60	snR60	LSM4	P40070	187 aa	Known RBP	0.53	□□□□□ -2.32
snR60	snR60	OST3	P48439	350 aa		0.53	□□□□□ -2.32
snR60	snR60	RSM27	P53305	110 aa		0.53	□□□□□ -2.32
snR60	snR60	FCF1	Q05498	189 aa	Predicted RBP	0.53	□□□□□ -2.32
snR60	snR60	SFG1	Q12507	346 aa		0.53	□□□□□ -2.32
snR60	snR60	DCP1	Q12517	231 aa	Predicted RBP	0.53	□□□□□ -2.32
snR60	snR60	GAL7	P08431	366 aa		0.52	□□□□□ -2.33
snR60	snR60	YHR122W	P38829	231 aa		0.52	□□□□□ -2.33
snR60	snR60	YMR134W	P40207	237 aa		0.52	□□□□□ -2.33
snR60	snR60	YIL089W	P40500	205 aa		0.52	□□□□□ -2.33
snR60	snR60	MRPL49	P40858	161 aa	Predicted RBP	0.52	□□□□□ -2.33
snR60	snR60	YHC3	P47040	408 aa		0.52	□□□□□ -2.33
snR60	snR60	MLC1	P53141	149 aa		0.52	□□□□□ -2.33
snR60	snR60	HCH1	P53834	153 aa		0.52	□□□□□ -2.33
snR60	snR60	GRH1	Q04410	372 aa	Known RBP	0.52	□□□□□ -2.33
snR60	snR60	SEC13	Q04491	297 aa	Known RBP	0.52	□□□□□ -2.33
snR60	snR60	BUD21	Q08492	214 aa	Predicted RBP	0.52	□□□□□ -2.33
snR60	snR60	YOR292C	Q08743	309 aa		0.52	□□□□□ -2.33
snR60	snR60	VIK1	Q12045	647 aa		0.52	□□□□□ -2.33
snR60	snR60	THR4	P16120	514 aa	Known RBP	0.51	□□□□□ -2.33
snR60	snR60	COY1	P34237	679 aa		0.51	□□□□□ -2.33
snR60	snR60	IML3	P38265	245 aa		0.51	□□□□□ -2.33
snR60	snR60	PES4	P39684	611 aa		0.51	□□□□□ -2.33
snR60	snR60	COG3	P40094	801 aa		0.51	□□□□□ -2.33
snR60	snR60	AYR1	P40471	297 aa		0.51	□□□□□ -2.33
snR60	snR60	UTP25	P40498	721 aa	Known RBP	0.51	□□□□□ -2.33
snR60	snR60	YFL064C	P43540	174 aa		0.51	□□□□□ -2.33
snR60	snR60	SLM2	P53955	656 aa		0.51	□□□□□ -2.33
snR60	snR60	TVP15	Q03860	143 aa		0.51	□□□□□ -2.33
snR60	snR60	SPC19	Q03954	165 aa		0.51	□□□□□ -2.33
snR60	snR60	ARC18	Q05933	178 aa	Known RBP	0.51	□□□□□ -2.33
snR60	snR60	YLR012C	Q07927	99 aa		0.51	□□□□□ -2.33
snR60	snR60	BOL1	Q3E793	110 aa		0.51	□□□□□ -2.33
snR60	snR60	TDH1	P00360	332 aa	Known RBP	0.5	□□□□□ -2.33
snR60	snR60	SPS100	P13130	326 aa		0.5	□□□□□ -2.33
snR60	snR60	GCG1	P32656	232 aa	Known RBP	0.5	□□□□□ -2.33
snR60	snR60	YOR062C	P36025	268 aa		0.5	□□□□□ -2.33
snR60	snR60	EFM4	P40516	257 aa		0.5	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms