RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 DBR1P24309 405 aaKnown RBP0.14□□□□□ -2.39
snR49snR49 LCP5P40079 357 aaPredicted RBP0.14□□□□□ -2.39
snR49snR49 RSC1P53236 928 aa0.14□□□□□ -2.39
snR49snR49 TSR2Q06672 205 aaKnown RBP0.14□□□□□ -2.39
snR49snR49 SCM3Q12334 223 aa0.14□□□□□ -2.39
snR49snR49 TDH1P00360 332 aaKnown RBP0.13□□□□□ -2.39
snR49snR49 MSK1P32048 576 aa0.13□□□□□ -2.39
snR49snR49 SUR1P33300 382 aa0.13□□□□□ -2.39
snR49snR49 LTV1P34078 463 aa0.13□□□□□ -2.39
snR49snR49 COY1P34237 679 aa0.13□□□□□ -2.39
snR49snR49 AYR1P40471 297 aa0.13□□□□□ -2.39
snR49snR49 MPS2P53159 387 aa0.13□□□□□ -2.39
snR49snR49 AIM33Q04516 312 aa0.13□□□□□ -2.39
snR49snR49 AGC1Q12482 902 aa0.13□□□□□ -2.39
snR49snR49 YPL247CQ12523 523 aa0.13□□□□□ -2.39
snR49snR49 BOL1Q3E793 110 aa0.13□□□□□ -2.39
snR49snR49 KTI12P34253 313 aaKnown RBP0.12□□□□□ -2.39
snR49snR49 YOR062CP36025 268 aa0.12□□□□□ -2.39
snR49snR49 YHR045WP38775 560 aa0.12□□□□□ -2.39
snR49snR49 DSE2P38844 325 aa0.12□□□□□ -2.39
snR49snR49 MND1P53102 219 aa0.12□□□□□ -2.39
snR49snR49 YGR266WP53326 701 aa0.12□□□□□ -2.39
snR49snR49 SMP3Q04174 516 aa0.12□□□□□ -2.39
snR49snR49 FSH3Q99369 266 aa0.12□□□□□ -2.39
snR49snR49 MDH1P17505 334 aaKnown RBP RIP-Chip data0.11□□□□□ -2.39not detected
snR49snR49 BUD2P33314 1104 aa0.11□□□□□ -2.39
snR49snR49 SYS1P41544 203 aa0.11□□□□□ -2.39
snR49snR49 FYV8P46949 817 aaKnown RBP0.11□□□□□ -2.39
snR49snR49 YNR066CP53752 436 aa0.11□□□□□ -2.39
snR49snR49 APC5Q08683 685 aa0.11□□□□□ -2.39
snR49snR49 SRN2Q99176 213 aa0.11□□□□□ -2.39
snR49snR49 REP1P03871 373 aa0.1□□□□□ -2.39
snR49snR49 ARF2P19146 181 aaKnown RBP0.1□□□□□ -2.39
snR49snR49 VPH2P32341 215 aa0.1□□□□□ -2.39
snR49snR49 AIM29P36154 155 aa0.1□□□□□ -2.39
snR49snR49 MLH1P38920 769 aa0.1□□□□□ -2.39
snR49snR49 RSM27P53305 110 aa0.1□□□□□ -2.39
snR49snR49 CIK1Q01649 594 aa0.1□□□□□ -2.39
snR49snR49 NUP49Q02199 472 aa0.1□□□□□ -2.39
snR49snR49 MRX9Q07349 420 aaKnown RBP0.1□□□□□ -2.39
snR49snR49 YAL063C-AQ3E791 96 aa0.1□□□□□ -2.39
snR49snR49 CDC31P06704 161 aaKnown RBP0.09□□□□□ -2.4
snR49snR49 PDX1P16451 410 aa0.09□□□□□ -2.4
snR49snR49 FUR1P18562 216 aaKnown RBP0.09□□□□□ -2.4
snR49snR49 CKI1P20485 582 aa0.09□□□□□ -2.4
snR49snR49 YCR102CP25608 368 aa0.09□□□□□ -2.4
snR49snR49 PSO2P30620 661 aa0.09□□□□□ -2.4
snR49snR49 MRPL49P40858 161 aaPredicted RBP0.09□□□□□ -2.4
snR49snR49 NAT4Q04751 285 aa0.09□□□□□ -2.4
snR49snR49 FCF1Q05498 189 aaPredicted RBP0.09□□□□□ -2.4
snR49snR49 AIM45Q12480 344 aaKnown RBP0.09□□□□□ -2.4
snR49snR49 PRM4Q12498 284 aa0.09□□□□□ -2.4
snR49snR49 YOL162WP0CF19 215 aa0.08□□□□□ -2.4
snR49snR49 SPS100P13130 326 aa0.08□□□□□ -2.4
snR49snR49 UTR1P21373 530 aa0.08□□□□□ -2.4
snR49snR49 ATG15P25641 520 aa0.08□□□□□ -2.4
snR49snR49 PET8P38921 284 aa0.08□□□□□ -2.4
snR49snR49 YER135CP40082 130 aa0.08□□□□□ -2.4
snR49snR49 UTP25P40498 721 aaKnown RBP0.08□□□□□ -2.4
snR49snR49 YOR292CQ08743 309 aa0.08□□□□□ -2.4
snR49snR49 YPL245WQ12179 454 aaKnown RBP0.08□□□□□ -2.4
snR49snR49 GPM3Q12326 303 aa0.08□□□□□ -2.4
snR49snR49 CDC7P06243 507 aa0.07□□□□□ -2.4
snR49snR49 RAD10P06838 210 aa0.07□□□□□ -2.4
snR49snR49 GRR1P24814 1151 aa0.07□□□□□ -2.4
snR49snR49 RPC53P25441 422 aa0.07□□□□□ -2.4
snR49snR49 ERG9P29704 444 aa0.07□□□□□ -2.4
snR49snR49 SNL1P40548 159 aa0.07□□□□□ -2.4
snR49snR49 OST3P48439 350 aa0.07□□□□□ -2.4
snR49snR49 CAB4P53332 305 aa0.07□□□□□ -2.4
snR49snR49 RMT2Q03305 412 aa0.07□□□□□ -2.4
snR49snR49 ARC18Q05933 178 aaKnown RBP0.07□□□□□ -2.4
snR49snR49 YDL121CQ07541 149 aa0.07□□□□□ -2.4
snR49snR49 DTD1Q07648 150 aaKnown RBP0.07□□□□□ -2.4
snR49snR49 YOL019WQ08157 551 aa0.07□□□□□ -2.4
snR49snR49 PEX27Q08580 376 aa0.07□□□□□ -2.4
snR49snR49 YOR268CQ08734 132 aa0.07□□□□□ -2.4
snR49snR49 RAD1P06777 1100 aa0.06□□□□□ -2.4
snR49snR49 MXR2P25566 168 aa0.06□□□□□ -2.4
snR49snR49 YDR089WP38966 869 aa0.06□□□□□ -2.4
snR49snR49 COG3P40094 801 aa0.06□□□□□ -2.4
snR49snR49 HCH1P53834 153 aa0.06□□□□□ -2.4
snR49snR49 SGA1P08019 549 aa0.05□□□□□ -2.4
snR49snR49 GAL7P08431 366 aa0.05□□□□□ -2.4
snR49snR49 YER188C-AP0C0V2 99 aa0.05□□□□□ -2.4
snR49snR49 RPL1AP0CX43 217 aaKnown RBP0.05□□□□□ -2.4
snR49snR49 RPL1BP0CX44 217 aaKnown RBP0.05□□□□□ -2.4
snR49snR49 DOA4P32571 926 aa0.05□□□□□ -2.4
snR49snR49 CDC13P32797 924 aaKnown RBP0.05□□□□□ -2.4
snR49snR49 IML3P38265 245 aa0.05□□□□□ -2.4
snR49snR49 SPL2P38839 148 aa0.05□□□□□ -2.4
snR49snR49 SEC13Q04491 297 aaKnown RBP0.05□□□□□ -2.4
snR49snR49 YKR045CP36138 183 aa0.04□□□□□ -2.4
snR49snR49 MBA1P38300 278 aa0.04□□□□□ -2.4
snR49snR49 GLE2P40066 365 aa0.04□□□□□ -2.4
snR49snR49 RPL10P41805 221 aaKnown RBP0.04□□□□□ -2.4
snR49snR49 YFL064CP43540 174 aa0.04□□□□□ -2.4
snR49snR49 LIF1P53150 421 aa0.04□□□□□ -2.4
snR49snR49 TVP15Q03860 143 aa0.04□□□□□ -2.4
snR49snR49 NNT1Q05874 261 aa0.04□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms