RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	TAF9	Q05027	157 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	YLR283W	Q05867	314 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	CTS2	Q06350	511 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	SHS1	Q07657	551 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	SMC5	Q08204	1093 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	DNL4	Q08387	944 aa	Predicted RBP	2.36	□□□□□ -2.03
ISU1	YPL135W	PPT2	Q12036	173 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	THP3	Q12049	470 aa	Known RBP	2.36	□□□□□ -2.03
ISU1	YPL135W	NCA2	Q12374	616 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	ATG31	Q12421	196 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	AHC1	Q12433	566 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	YOS9	Q99220	542 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	RIF1	P29539	1916 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	FLO1	P32768	1537 aa		2.36	□□□□□ -2.03
ISU1	YPL135W	CDC36	P06100	191 aa	Predicted RBP	2.35	□□□□□ -2.03
ISU1	YPL135W	DST1	P07273	309 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	YLL053C	P0CD98	152 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	GPI12	P23797	304 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	CIN8	P27895	1000 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	CWP1	P28319	239 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	ZIP1	P31111	875 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	CYM1	P32898	989 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	VAM7	P32912	316 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	SKN1	P33336	771 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	YKL097C	P34245	136 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	YKL162C	P36052	402 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	YBR056W	P38081	501 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	RIB5	P38145	238 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	YBR062C	P38239	180 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	MMS21	P38632	267 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	LYS12	P40495	371 aa	Known RBP	2.35	□□□□□ -2.03
ISU1	YPL135W	YIL001W	P40560	513 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	YFL067W	P43537	175 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	YFH7	P43591	353 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	SPP2	Q02521	185 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	FAR8	Q05040	523 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	BUR2	Q05949	395 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	LDS2	Q08218	356 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	SKI7	Q08491	747 aa	Predicted RBP	2.35	□□□□□ -2.03
ISU1	YPL135W	PRP46	Q12417	451 aa	Predicted RBP	2.35	□□□□□ -2.03
ISU1	YPL135W	YBR298C-A	Q8TGK4	73 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	UBA3	Q99344	299 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	PMD1	P32634	1753 aa		2.35	□□□□□ -2.03
ISU1	YPL135W	TDH2	P00358	332 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.34	□□□□□ -2.03	not detected
ISU1	YPL135W	ARF1	P11076	181 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	CLN3	P13365	580 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	MET16	P18408	261 aa	Predicted RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	DAL81	P21657	970 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	SLM5	P25345	492 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	MXR2	P25566	168 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	YCR016W	P25617	290 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	RPS5	P26783	225 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	DEG1	P31115	442 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	MRPS5	P33759	307 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	COS9	P36034	407 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	AIM29	P36154	155 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	YBR137W	P38276	179 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	YIL067C	P40514	678 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	NCA3	P46955	337 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	HAM1	P47119	197 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	TRF5	P48561	642 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	PXR1	P53335	271 aa	Predicted RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	MSO1	P53604	210 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	BIO4	P53630	237 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	HXT11	P54862	567 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	IRC4	Q03036	179 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	CSM3	Q04659	317 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	FUS2	Q05670	677 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	BSC6	Q08280	497 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	SGT1	Q08446	395 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	RAX1	Q08760	435 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	SNX3	Q08826	162 aa	Known RBP	2.34	□□□□□ -2.03
ISU1	YPL135W	GLE1	Q12315	538 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	APC2	Q12440	853 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	YCL021W-A	Q96VH3	125 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	RGS2	Q99188	309 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	SEY1	Q99287	776 aa		2.34	□□□□□ -2.03
ISU1	YPL135W	YLR462W	O13556	202 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	ADH2	P00331	348 aa	Known RBP	2.33	□□□□□ -2.04
ISU1	YPL135W	FUS3	P16892	353 aa	Known RBP	2.33	□□□□□ -2.04
ISU1	YPL135W	FAR1	P21268	830 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	RRT12	P25381	491 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	ICL1	P28240	557 aa	Predicted RBP	2.33	□□□□□ -2.04
ISU1	YPL135W	RME1	P32338	300 aa	Known RBP	2.33	□□□□□ -2.04
ISU1	YPL135W	SKG6	P32900	734 aa	Predicted RBP	2.33	□□□□□ -2.04
ISU1	YPL135W	ECM4	P36156	370 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	MIX23	P38162	196 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	YBR032W	P38223	100 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	YMR262W	P38430	313 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	YHL049C	P38722	271 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	FAA2	P39518	744 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	YEL075C	P39972	122 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	DSE1	P40077	573 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	YER189W	P40104	122 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	MMF1	P40185	145 aa	Known RBP	2.33	□□□□□ -2.04
ISU1	YPL135W	YRB2	P40517	327 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	IDP2	P41939	412 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	YFL064C	P43540	174 aa		2.33	□□□□□ -2.04
ISU1	YPL135W	WWM1	P43582	211 aa	Known RBP	2.33	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms