RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeast

Gene SGF11, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGF11	YPL047W	TIM22	Q12328	207 aa		0.66	□□□□□ -2.3
SGF11	YPL047W	REP1	P03871	373 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	RAD1	P06777	1100 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	YAK1	P14680	807 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	PHO80	P20052	293 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	UTR1	P21373	530 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	PRE7	P23724	241 aa	Known RBP	0.65	□□□□□ -2.31
SGF11	YPL047W	MXR2	P25566	168 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	FAA1	P30624	700 aa	Known RBP	0.65	□□□□□ -2.31
SGF11	YPL047W	PXA2	P34230	853 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	KTI12	P34253	313 aa	Known RBP	0.65	□□□□□ -2.31
SGF11	YPL047W	POP2	P39008	433 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	EDC2	P40023	145 aa	Predicted RBP	0.65	□□□□□ -2.31
SGF11	YPL047W	YIL089W	P40500	205 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	SNL1	P40548	159 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	FYV8	P46949	817 aa	Known RBP	0.65	□□□□□ -2.31
SGF11	YPL047W	YHC3	P47040	408 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	YNR068C	P53754	272 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	AQR1	P53943	586 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	NAT4	Q04751	285 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	MIM1	Q08176	113 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	TY3A-G	Q12173	290 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	YOR012W	Q12351	137 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	PFK27	Q12471	397 aa	Predicted RBP	0.65	□□□□□ -2.31
SGF11	YPL047W	SMC6	Q12749	1114 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	TY3A-I	Q99219	290 aa		0.65	□□□□□ -2.31
SGF11	YPL047W	CBP2	P03874	630 aa	Predicted RBP	0.64	□□□□□ -2.31
SGF11	YPL047W	HIS3	P06633	220 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	MRPL20	P22354	195 aa	Predicted RBP	0.64	□□□□□ -2.31
SGF11	YPL047W	SCO1	P23833	295 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	RDS1	P25611	832 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	HMX1	P32339	317 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	PUP2	P32379	260 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	GCG1	P32656	232 aa	Known RBP	0.64	□□□□□ -2.31
SGF11	YPL047W	MDL1	P33310	695 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	MPE1	P35728	441 aa	Known RBP	0.64	□□□□□ -2.31
SGF11	YPL047W	NRG2	P38082	220 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	YGR266W	P53326	701 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	YNR066C	P53752	436 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	OSH6	Q02201	448 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	YLR012C	Q07927	99 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	RDL2	Q08742	149 aa	Known RBP	0.64	□□□□□ -2.31
SGF11	YPL047W	SFG1	Q12507	346 aa		0.64	□□□□□ -2.31
SGF11	YPL047W	RPL6B	P05739	176 aa	Known RBP	0.63	□□□□□ -2.31
SGF11	YPL047W	MAS1	P10507	462 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	CDC42	P19073	191 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	UBA1	P22515	1024 aa	Known RBP	0.63	□□□□□ -2.31
SGF11	YPL047W	AIM29	P36154	155 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	LRP1	P38801	184 aa	Known RBP	0.63	□□□□□ -2.31
SGF11	YPL047W	CAJ1	P39101	391 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	PES4	P39684	611 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	EFM4	P40516	257 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	YJR141W	P47172	347 aa	Predicted RBP	0.63	□□□□□ -2.31
SGF11	YPL047W	RSM27	P53305	110 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	HCH1	P53834	153 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	RPL6A	Q02326	176 aa	Known RBP	0.63	□□□□□ -2.31
SGF11	YPL047W	UBX2	Q04228	584 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	DCR2	Q05924	578 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	VIK1	Q12045	647 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	PRR2	Q12310	699 aa		0.63	□□□□□ -2.31
SGF11	YPL047W	TFB5	Q3E7C1	72 aa	Predicted RBP	0.63	□□□□□ -2.31
SGF11	YPL047W	HSP82	P02829	709 aa	Known RBP	0.62	□□□□□ -2.31
SGF11	YPL047W	DPM1	P14020	267 aa	Known RBP	0.62	□□□□□ -2.31
SGF11	YPL047W	VPS1	P21576	704 aa	Known RBP	0.62	□□□□□ -2.31
SGF11	YPL047W	RRT12	P25381	491 aa		0.62	□□□□□ -2.31
SGF11	YPL047W	ACB1	P31787	87 aa		0.62	□□□□□ -2.31
SGF11	YPL047W	SUR1	P33300	382 aa		0.62	□□□□□ -2.31
SGF11	YPL047W	TRM7	P38238	310 aa	Known RBP	0.62	□□□□□ -2.31
SGF11	YPL047W	SYS1	P41544	203 aa		0.62	□□□□□ -2.31
SGF11	YPL047W	YFL064C	P43540	174 aa		0.62	□□□□□ -2.31
SGF11	YPL047W	YJL055W	P47044	245 aa		0.62	□□□□□ -2.31
SGF11	YPL047W	UTP6	Q02354	440 aa	Known RBP	0.62	□□□□□ -2.31
SGF11	YPL047W	MYO5	Q04439	1219 aa	Known RBP	0.62	□□□□□ -2.31
SGF11	YPL047W	SEC13	Q04491	297 aa	Known RBP	0.62	□□□□□ -2.31
SGF11	YPL047W	YMR310C	Q04867	317 aa	Predicted RBP	0.62	□□□□□ -2.31
SGF11	YPL047W	SKS1	Q12505	502 aa		0.62	□□□□□ -2.31
SGF11	YPL047W	GAL7	P08431	366 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	RBK1	P25332	333 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	VMA8	P32610	256 aa	Known RBP	0.61	□□□□□ -2.31
SGF11	YPL047W	IML3	P38265	245 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	YHR045W	P38775	560 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	FCY21	P40039	528 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	YER188W	P40103	239 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	BTT1	P40314	149 aa	Predicted RBP	0.61	□□□□□ -2.31
SGF11	YPL047W	MRPL49	P40858	161 aa	Predicted RBP	0.61	□□□□□ -2.31
SGF11	YPL047W	YFL040W	P43562	540 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	RPA34	P47006	233 aa	Predicted RBP	0.61	□□□□□ -2.31
SGF11	YPL047W	DAN1	P47178	298 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	OST3	P48439	350 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	MIG2	P53035	382 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	TAF6	P53040	516 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	MND1	P53102	219 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	COS6	P53344	381 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	SSU72	P53538	206 aa	Predicted RBP	0.61	□□□□□ -2.31
SGF11	YPL047W	EBS1	Q03466	884 aa	Known RBP	0.61	□□□□□ -2.31
SGF11	YPL047W	TVP15	Q03860	143 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	SPO77	Q06134	477 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	YDL144C	Q07589	356 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	YOR292C	Q08743	309 aa		0.61	□□□□□ -2.31
SGF11	YPL047W	RTC5	Q12108	567 aa	Known RBP	0.61	□□□□□ -2.31

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