RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W VEL1P53058 206 aa2.83□□□□□ -1.96
MSH2YOL090W RNT1Q02555 471 aa2.83□□□□□ -1.96
MSH2YOL090W HER2Q03557 464 aa2.83□□□□□ -1.96
MSH2YOL090W GPM2Q12008 311 aa2.83□□□□□ -1.96
MSH2YOL090W DAP1Q12091 152 aa2.83□□□□□ -1.96
MSH2YOL090W YDL109CQ12103 647 aa2.83□□□□□ -1.96
MSH2YOL090W HIS4P00815 799 aaKnown RBP2.83□□□□□ -1.96
MSH2YOL090W NDC1P32500 655 aa2.83□□□□□ -1.96
MSH2YOL090W TOD6P34219 525 aa2.83□□□□□ -1.96
MSH2YOL090W AST1P35183 429 aa2.83□□□□□ -1.96
MSH2YOL090W AME1P38313 324 aa2.83□□□□□ -1.96
MSH2YOL090W PRS2P38620 318 aaKnown RBP2.83□□□□□ -1.96
MSH2YOL090W FRE4P53746 719 aa2.83□□□□□ -1.96
MSH2YOL090W NDE2Q07500 545 aa2.83□□□□□ -1.96
MSH2YOL090W HIS1P00498 297 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W RPL31AP0C2H8 113 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W SSC1P0CS90 654 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W FBA1P14540 359 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W DPB2P24482 689 aaPredicted RBP2.82□□□□□ -1.96
MSH2YOL090W YCR102CP25608 368 aa2.82□□□□□ -1.96
MSH2YOL090W SWD2P36104 329 aaPredicted RBP2.82□□□□□ -1.96
MSH2YOL090W BMT2P38278 337 aa2.82□□□□□ -1.96
MSH2YOL090W DDI1P40087 428 aa2.82□□□□□ -1.96
MSH2YOL090W YIP1P53039 248 aa2.82□□□□□ -1.96
MSH2YOL090W VPS74Q06385 345 aa2.82□□□□□ -1.96
MSH2YOL090W CSM4Q08955 156 aa2.82□□□□□ -1.96
MSH2YOL090W ERP3Q12403 225 aa2.82□□□□□ -1.96
MSH2YOL090W EHD3P28817 500 aa2.82□□□□□ -1.96
MSH2YOL090W NUP2P32499 720 aa2.82□□□□□ -1.96
MSH2YOL090W YPT52P36018 234 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W OMA1P36163 345 aa2.82□□□□□ -1.96
MSH2YOL090W CBP4P37267 147 aa2.82□□□□□ -1.96
MSH2YOL090W YBR241CP38142 488 aa2.82□□□□□ -1.96
MSH2YOL090W RFT1P38206 574 aaPredicted RBP2.82□□□□□ -1.96
MSH2YOL090W DHH1P39517 506 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W FRT2P39734 528 aa2.82□□□□□ -1.96
MSH2YOL090W THO1P40040 218 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W ARG2P40360 574 aa2.82□□□□□ -1.96
MSH2YOL090W POG1P40473 351 aa2.82□□□□□ -1.96
MSH2YOL090W GAB1P41733 394 aa2.82□□□□□ -1.96
MSH2YOL090W GPI1P53306 609 aa2.82□□□□□ -1.96
MSH2YOL090W YNL040WP53960 456 aaPredicted RBP2.82□□□□□ -1.96
MSH2YOL090W EBS1Q03466 884 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W THI7Q05998 598 aa2.82□□□□□ -1.96
MSH2YOL090W YDL218WQ07629 317 aa2.82□□□□□ -1.96
MSH2YOL090W RGT2Q12300 763 aa2.82□□□□□ -1.96
MSH2YOL090W YOP1Q12402 180 aa2.82□□□□□ -1.96
MSH2YOL090W HKR1P41809 1802 aa2.82□□□□□ -1.96
MSH2YOL090W AQY1P0CD91 305 aa2.82□□□□□ -1.96
MSH2YOL090W MRP1P10662 321 aaKnown RBP2.82□□□□□ -1.96
MSH2YOL090W CMK2P22517 447 aa2.82□□□□□ -1.96
MSH2YOL090W RBK1P25332 333 aa2.82□□□□□ -1.96
MSH2YOL090W DCC1P25559 380 aa2.82□□□□□ -1.96
MSH2YOL090W POF1P25576 258 aa2.82□□□□□ -1.96
MSH2YOL090W SSO1P32867 290 aa2.82□□□□□ -1.96
MSH2YOL090W MNS1P32906 549 aa2.82□□□□□ -1.96
MSH2YOL090W ATO2P32907 282 aa2.82□□□□□ -1.96
MSH2YOL090W LOS1P33418 1100 aaPredicted RBP2.82□□□□□ -1.96
MSH2YOL090W FES1P38260 290 aa2.82□□□□□ -1.96
MSH2YOL090W IKI1P38874 309 aa2.82□□□□□ -1.96
MSH2YOL090W GDS1P41913 522 aa2.82□□□□□ -1.96
MSH2YOL090W YJR079WP47126 109 aa2.82□□□□□ -1.96
MSH2YOL090W GET1P53192 235 aa2.82□□□□□ -1.96
MSH2YOL090W PRP38Q00723 242 aaPredicted RBP2.82□□□□□ -1.96
MSH2YOL090W YDC1Q02896 317 aa2.82□□□□□ -1.96
MSH2YOL090W PRM15Q03262 622 aa2.82□□□□□ -1.96
MSH2YOL090W BNA5Q05979 453 aa2.82□□□□□ -1.96
MSH2YOL090W ATG17Q06410 417 aa2.82□□□□□ -1.96
MSH2YOL090W AI5_BETAQ9ZZX0 354 aa2.82□□□□□ -1.96
MSH2YOL090W LSB5P25369 354 aa2.81□□□□□ -1.96
MSH2YOL090W COQ3P27680 312 aa2.81□□□□□ -1.96
MSH2YOL090W ACB1P31787 87 aa2.81□□□□□ -1.96
MSH2YOL090W DBP7P36120 742 aaKnown RBP2.81□□□□□ -1.96
MSH2YOL090W LYS1P38998 373 aaRIP-Chip data2.81□□□□□ -1.96not detected
MSH2YOL090W ICE2P40499 491 aa2.81□□□□□ -1.96
MSH2YOL090W SNZ3P43545 298 aa2.81□□□□□ -1.96
MSH2YOL090W TAD2P47058 250 aa2.81□□□□□ -1.96
MSH2YOL090W CDH1P53197 566 aa2.81□□□□□ -1.96
MSH2YOL090W MTM1P53320 366 aa2.81□□□□□ -1.96
MSH2YOL090W SSU72P53538 206 aaPredicted RBP2.81□□□□□ -1.96
MSH2YOL090W SNZ2P53824 298 aa2.81□□□□□ -1.96
MSH2YOL090W ARK1P53974 638 aa2.81□□□□□ -1.96
MSH2YOL090W CTF19Q02732 369 aa2.81□□□□□ -1.96
MSH2YOL090W IRC4Q03036 179 aa2.81□□□□□ -1.96
MSH2YOL090W VPS60Q03390 229 aa2.81□□□□□ -1.96
MSH2YOL090W YOR389WQ08912 624 aa2.81□□□□□ -1.96
MSH2YOL090W SLM3Q12093 417 aa2.81□□□□□ -1.96
MSH2YOL090W COX13P32799 129 aa2.81□□□□□ -1.96
MSH2YOL090W MCR1P36060 302 aaKnown RBP2.81□□□□□ -1.96
MSH2YOL090W VPS51P36116 164 aa2.81□□□□□ -1.96
MSH2YOL090W YCR041WP37265 110 aa2.81□□□□□ -1.96
MSH2YOL090W CHK1P38147 527 aa2.81□□□□□ -1.96
MSH2YOL090W ARN1P38731 627 aa2.81□□□□□ -1.96
MSH2YOL090W PCL5P38794 229 aa2.81□□□□□ -1.96
MSH2YOL090W BDH2P39713 417 aa2.81□□□□□ -1.96
MSH2YOL090W KEG1P43614 200 aa2.81□□□□□ -1.96
MSH2YOL090W KIN4Q01919 800 aa2.81□□□□□ -1.96
MSH2YOL090W YPL077CQ02831 240 aa2.81□□□□□ -1.96
MSH2YOL090W GIS1Q03833 894 aa2.81□□□□□ -1.96
MSH2YOL090W PLB3Q08108 686 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms