RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	PET100	P38958	111 aa		2.64	□□□□□ -1.99
TSR4	YOL022C	RCY1	P39531	840 aa		2.64	□□□□□ -1.99
TSR4	YOL022C	AGP3	P43548	558 aa		2.64	□□□□□ -1.99
TSR4	YOL022C	YGR015C	P53208	328 aa		2.64	□□□□□ -1.99
TSR4	YOL022C	TPC1	P53257	314 aa		2.64	□□□□□ -1.99
TSR4	YOL022C	MPP6	P53725	186 aa	Predicted RBP	2.64	□□□□□ -1.99
TSR4	YOL022C	SED5	Q01590	340 aa		2.64	□□□□□ -1.99
TSR4	YOL022C	SPP2	Q02521	185 aa		2.64	□□□□□ -1.99
TSR4	YOL022C	BER1	Q06688	274 aa	Known RBP	2.64	□□□□□ -1.99
TSR4	YOL022C	MRX9	Q07349	420 aa	Known RBP	2.64	□□□□□ -1.99
TSR4	YOL022C	ATP6	P00854	259 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	RPL31A	P0C2H8	113 aa	Known RBP	2.63	□□□□□ -1.99
TSR4	YOL022C	HPR1	P17629	752 aa	Known RBP	2.63	□□□□□ -1.99
TSR4	YOL022C	PCL1	P24867	279 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	TPO5	P36029	618 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	MCH2	P36032	473 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	UTH1	P36135	365 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	SHE1	P38200	338 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	RCK1	P38622	512 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	WSC4	P38739	605 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	SOP4	P39543	234 aa	Predicted RBP	2.63	□□□□□ -1.99
TSR4	YOL022C	ALD5	P40047	520 aa	Known RBP	2.63	□□□□□ -1.99
TSR4	YOL022C	KEL2	P50090	882 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	HAL1	Q01766	294 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	RRN5	Q02983	363 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	UTP23	Q12339	254 aa	Known RBP	2.63	□□□□□ -1.99
TSR4	YOL022C	ERP3	Q12403	225 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	YDL012C	Q12489	107 aa		2.63	□□□□□ -1.99
TSR4	YOL022C	SPA2	P23201	1466 aa	Known RBP	2.63	□□□□□ -1.99
TSR4	YOL022C	YKL071W	P36086	256 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	YPC1	P38298	316 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	PET8	P38921	284 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	SHQ1	P40486	507 aa	Predicted RBP	2.62	□□□□□ -1.99
TSR4	YOL022C	GDS1	P41913	522 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	STB1	P42845	420 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	IGD1	P43598	195 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	PGU1	P47180	361 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	UBC13	P52490	153 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	VHT1	P53241	593 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	RMI1	Q02685	241 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	YPL077C	Q02831	240 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	ASR1	Q06834	288 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	DTD1	Q07648	150 aa	Known RBP	2.62	□□□□□ -1.99
TSR4	YOL022C	RPN8	Q08723	338 aa	Known RBP	2.62	□□□□□ -1.99
TSR4	YOL022C	RPL21B	Q12672	160 aa	Known RBP	2.62	□□□□□ -1.99
TSR4	YOL022C	IZH4	Q99393	312 aa		2.62	□□□□□ -1.99
TSR4	YOL022C	MHP1	P43638	1398 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	RPL24A	P04449	155 aa	Known RBP	2.61	□□□□□ -1.99
TSR4	YOL022C	ERD1	P16151	362 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	YSR3	P23501	404 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	RPL16B	P26785	198 aa	Known RBP	2.61	□□□□□ -1.99
TSR4	YOL022C	COT1	P32798	439 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
TSR4	YOL022C	YKL063C	P35725	167 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	BMT2	P38278	337 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	SMC2	P38989	1170 aa	Known RBP	2.61	□□□□□ -1.99
TSR4	YOL022C	SWC4	P53201	476 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	LSB1	P53281	241 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	RNH201	P53942	307 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	ATC1	Q04005	294 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	YDR115W	Q04598	105 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	GPN3	Q06543	272 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	MIM1	Q08176	113 aa		2.61	□□□□□ -1.99
TSR4	YOL022C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
TSR4	YOL022C	COX4	P04037	155 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
TSR4	YOL022C	INO2	P26798	304 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	GCG1	P32656	232 aa	Known RBP	2.6	□□□□□ -1.99
TSR4	YOL022C	RPC37	P36121	282 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	MRP21	P38175	177 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	GPI18	P38211	433 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	SHE3	P38272	425 aa	Known RBP	2.6	□□□□□ -1.99
TSR4	YOL022C	MRX5	P47007	382 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	NRM1	P53718	249 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	MRX11	Q03079	207 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	YLR446W	Q06204	433 aa		2.6	□□□□□ -1.99
TSR4	YOL022C	TCB3	Q03640	1545 aa	Known RBP	2.59	□□□□□ -1.99
TSR4	YOL022C	BGL2	P15703	313 aa	Known RBP	2.59	□□□□□ -1.99
TSR4	YOL022C	POL30	P15873	258 aa	Known RBP	2.59	□□□□□ -1.99
TSR4	YOL022C	MRPL20	P22354	195 aa	Predicted RBP	2.59	□□□□□ -1.99
TSR4	YOL022C	IES6	P32617	166 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	YJL118W	P47022	219 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	KAP114	P53067	1004 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	COX20	Q04935	205 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	GMC2	Q06201	188 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	TAZ1	Q06510	381 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	MMT2	Q08970	484 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	SRO7	Q12038	1033 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	POM33	Q12164	279 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	YOL107W	Q12239	342 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	BI3	Q9ZZW7	517 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	FAB1	P34756	2278 aa		2.59	□□□□□ -1.99
TSR4	YOL022C	SSK22	P25390	1331 aa	Predicted RBP	2.59	□□□□□ -2
TSR4	YOL022C	COX2	P00410	251 aa		2.58	□□□□□ -2
TSR4	YOL022C	ILV1	P00927	576 aa	Known RBP	2.58	□□□□□ -2
TSR4	YOL022C	RSR1	P13856	272 aa		2.58	□□□□□ -2
TSR4	YOL022C	IMP3	P32899	183 aa	Predicted RBP	2.58	□□□□□ -2
TSR4	YOL022C	SKG6	P32900	734 aa	Predicted RBP	2.58	□□□□□ -2
TSR4	YOL022C	COY1	P34237	679 aa		2.58	□□□□□ -2
TSR4	YOL022C	MRPL27	P36526	146 aa	Predicted RBP	2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms