RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A ASC1P38011 319 aaKnown RBP2.92□□□□□ -1.94
YSF3YNL138W-A CHK1P38147 527 aa2.92□□□□□ -1.94
YSF3YNL138W-A ZTA1P38230 334 aaKnown RBP2.92□□□□□ -1.94
YSF3YNL138W-A TRM7P38238 310 aaKnown RBP2.92□□□□□ -1.94
YSF3YNL138W-A STN1P38960 494 aa2.92□□□□□ -1.94
YSF3YNL138W-A YDR089WP38966 869 aa2.92□□□□□ -1.94
YSF3YNL138W-A CUP9P41817 306 aa2.92□□□□□ -1.94
YSF3YNL138W-A HOP2P53187 214 aa2.92□□□□□ -1.94
YSF3YNL138W-A RPN14P53196 417 aa2.92□□□□□ -1.94
YSF3YNL138W-A FAR10Q06001 478 aa2.92□□□□□ -1.94
YSF3YNL138W-A FDH1Q08911 376 aa2.92□□□□□ -1.94
YSF3YNL138W-A AEP3Q12089 606 aa2.92□□□□□ -1.94
YSF3YNL138W-A YOL107WQ12239 342 aa2.92□□□□□ -1.94
YSF3YNL138W-A LAG2Q92325 660 aa2.92□□□□□ -1.94
YSF3YNL138W-A CPA1P07258 411 aaKnown RBP2.91□□□□□ -1.94
YSF3YNL138W-A GAL7P08431 366 aa2.91□□□□□ -1.94
YSF3YNL138W-A DCC1P25559 380 aa2.91□□□□□ -1.94
YSF3YNL138W-A MXR2P25566 168 aa2.91□□□□□ -1.94
YSF3YNL138W-A YCL068CP25593 260 aa2.91□□□□□ -1.94
YSF3YNL138W-A FAA1P30624 700 aaKnown RBP2.91□□□□□ -1.94
YSF3YNL138W-A UBC6P33296 250 aaPredicted RBP2.91□□□□□ -1.94
YSF3YNL138W-A OM14P38325 134 aa2.91□□□□□ -1.94
YSF3YNL138W-A SBE22P38814 852 aa2.91□□□□□ -1.94
YSF3YNL138W-A GAT2P40209 560 aa2.91□□□□□ -1.94
YSF3YNL138W-A JEM1P40358 645 aa2.91□□□□□ -1.94
YSF3YNL138W-A SIM1P40472 476 aa2.91□□□□□ -1.94
YSF3YNL138W-A SNZ3P43545 298 aa2.91□□□□□ -1.94
YSF3YNL138W-A IBA57P47158 497 aa2.91□□□□□ -1.94
YSF3YNL138W-A YGR111WP53265 400 aa2.91□□□□□ -1.94
YSF3YNL138W-A SNZ2P53824 298 aa2.91□□□□□ -1.94
YSF3YNL138W-A VPS9P54787 451 aa2.91□□□□□ -1.94
YSF3YNL138W-A CIK1Q01649 594 aa2.91□□□□□ -1.94
YSF3YNL138W-A STD1Q02794 444 aa2.91□□□□□ -1.94
YSF3YNL138W-A CCE1Q03702 353 aa2.91□□□□□ -1.94
YSF3YNL138W-A YLR297WQ05899 129 aa2.91□□□□□ -1.94
YSF3YNL138W-A RRP9Q06506 573 aaKnown RBP2.91□□□□□ -1.94
YSF3YNL138W-A PGC1Q08959 321 aa2.91□□□□□ -1.94
YSF3YNL138W-A YPL150WQ12152 901 aa2.91□□□□□ -1.94
YSF3YNL138W-A TPT1Q12272 230 aaKnown RBP2.91□□□□□ -1.94
YSF3YNL138W-A Q0297Q9ZZV8 51 aa2.91□□□□□ -1.94
YSF3YNL138W-A MDM35O60200 86 aa2.9□□□□□ -1.95
YSF3YNL138W-A RPS3P05750 240 aaKnown RBP2.9□□□□□ -1.95
YSF3YNL138W-A AEP1P32493 518 aa2.9□□□□□ -1.95
YSF3YNL138W-A MDL1P33310 695 aa2.9□□□□□ -1.95
YSF3YNL138W-A MAL32P38158 584 aa2.9□□□□□ -1.95
YSF3YNL138W-A STP2P38704 541 aa2.9□□□□□ -1.95
YSF3YNL138W-A FAD1P38913 306 aa2.9□□□□□ -1.95
YSF3YNL138W-A GDI1P39958 451 aaKnown RBP2.9□□□□□ -1.95
YSF3YNL138W-A ATM1P40416 690 aa2.9□□□□□ -1.95
YSF3YNL138W-A YJL055WP47044 245 aa2.9□□□□□ -1.95
YSF3YNL138W-A YJR085CP47131 105 aaKnown RBP2.9□□□□□ -1.95
YSF3YNL138W-A BRO1P48582 844 aa2.9□□□□□ -1.95
YSF3YNL138W-A YLR152CP54072 576 aa2.9□□□□□ -1.95
YSF3YNL138W-A SED5Q01590 340 aa2.9□□□□□ -1.95
YSF3YNL138W-A RPN9Q04062 393 aaKnown RBP2.9□□□□□ -1.95
YSF3YNL138W-A UAF30Q08747 228 aa2.9□□□□□ -1.95
YSF3YNL138W-A YOR376WQ08900 122 aa2.9□□□□□ -1.95
YSF3YNL138W-A MDM32Q12171 622 aa2.9□□□□□ -1.95
YSF3YNL138W-A GPM3Q12326 303 aa2.9□□□□□ -1.95
YSF3YNL138W-A BI3Q9ZZW7 517 aa2.9□□□□□ -1.95
YSF3YNL138W-A NAM2P11325 894 aa2.89□□□□□ -1.95
YSF3YNL138W-A RIM1P32445 135 aaKnown RBP2.89□□□□□ -1.95
YSF3YNL138W-A MEI5P32489 222 aa2.89□□□□□ -1.95
YSF3YNL138W-A CYS4P32582 507 aaKnown RBP2.89□□□□□ -1.95
YSF3YNL138W-A SFC1P33303 322 aa2.89□□□□□ -1.95
YSF3YNL138W-A YER079WP40052 210 aaKnown RBP2.89□□□□□ -1.95
YSF3YNL138W-A YIL054WP40524 105 aa2.89□□□□□ -1.95
YSF3YNL138W-A BUD13P46947 266 aaPredicted RBP2.89□□□□□ -1.95
YSF3YNL138W-A MDE1P47095 244 aa2.89□□□□□ -1.95
YSF3YNL138W-A PRO2P54885 456 aaKnown RBP2.89□□□□□ -1.95
YSF3YNL138W-A CDC14Q00684 551 aa2.89□□□□□ -1.95
YSF3YNL138W-A MEH1Q02205 184 aa2.89□□□□□ -1.95
YSF3YNL138W-A MMT1Q03218 510 aa2.89□□□□□ -1.95
YSF3YNL138W-A IRC25Q07951 179 aa2.89□□□□□ -1.95
YSF3YNL138W-A WTM1Q12363 437 aaKnown RBP2.89□□□□□ -1.95
YSF3YNL138W-A CDC33P07260 213 aaKnown RBP2.88□□□□□ -1.95
YSF3YNL138W-A EXG1P23776 448 aaKnown RBP2.88□□□□□ -1.95
YSF3YNL138W-A PMT2P31382 759 aa2.88□□□□□ -1.95
YSF3YNL138W-A PHA2P32452 334 aa2.88□□□□□ -1.95
YSF3YNL138W-A RPS27AP35997 82 aaKnown RBP2.88□□□□□ -1.95
YSF3YNL138W-A ATP3P38077 311 aaKnown RBP2.88□□□□□ -1.95
YSF3YNL138W-A RPS27BP38711 82 aa2.88□□□□□ -1.95
YSF3YNL138W-A YIL029CP40538 142 aa2.88□□□□□ -1.95
YSF3YNL138W-A MKC7P53379 596 aa2.88□□□□□ -1.95
YSF3YNL138W-A HST1P53685 503 aa2.88□□□□□ -1.95
YSF3YNL138W-A DCI1Q08558 271 aa2.88□□□□□ -1.95
YSF3YNL138W-A NCA2Q12374 616 aa2.88□□□□□ -1.95
YSF3YNL138W-A DST1P07273 309 aa2.87□□□□□ -1.95
YSF3YNL138W-A CAP2P13517 287 aa2.87□□□□□ -1.95
YSF3YNL138W-A RRP1P35178 278 aaPredicted RBP2.87□□□□□ -1.95
YSF3YNL138W-A OLA1P38219 394 aaKnown RBP2.87□□□□□ -1.95
YSF3YNL138W-A APE4P38821 490 aa2.87□□□□□ -1.95
YSF3YNL138W-A MNL1P38888 796 aa2.87□□□□□ -1.95
YSF3YNL138W-A ATP22P50273 684 aaPredicted RBP2.87□□□□□ -1.95
YSF3YNL138W-A MRM2P53123 320 aa2.87□□□□□ -1.95
YSF3YNL138W-A SHY1P53266 389 aa2.87□□□□□ -1.95
YSF3YNL138W-A MAL12P53341 584 aa2.87□□□□□ -1.95
YSF3YNL138W-A MTQ1P53944 314 aa2.87□□□□□ -1.95
YSF3YNL138W-A TRM12Q04235 462 aa2.87□□□□□ -1.95
YSF3YNL138W-A NOP6Q07623 225 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 91.8 ms