RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W NUP1P20676 1076 aa8.64□□□□□ -1.03
LIP1YMR298W NAR1P23503 491 aaKnown RBP8.64□□□□□ -1.03
LIP1YMR298W YCL002CP25565 263 aa8.64□□□□□ -1.03
LIP1YMR298W PTC6P25646 442 aa8.64□□□□□ -1.03
LIP1YMR298W PRE2P30656 287 aaKnown RBP8.64□□□□□ -1.03
LIP1YMR298W SPT14P32363 452 aa8.64□□□□□ -1.03
LIP1YMR298W TRS65P32893 560 aa8.64□□□□□ -1.03
LIP1YMR298W SLC1P33333 303 aa8.64□□□□□ -1.03
LIP1YMR298W HIS7P33734 552 aaKnown RBP8.64□□□□□ -1.03
LIP1YMR298W LST4P34239 828 aa8.64□□□□□ -1.03
LIP1YMR298W SDS22P36047 338 aa8.64□□□□□ -1.03
LIP1YMR298W RPP1P38786 293 aa8.64□□□□□ -1.03
LIP1YMR298W YHR210CP38893 341 aa8.64□□□□□ -1.03
LIP1YMR298W BPL1P48445 690 aaPredicted RBP8.64□□□□□ -1.03
LIP1YMR298W MRH4P53166 561 aa8.64□□□□□ -1.03
LIP1YMR298W BUD9P53226 547 aa8.64□□□□□ -1.03
LIP1YMR298W PAU12P53343 120 aa8.64□□□□□ -1.03
LIP1YMR298W RHO5P53879 331 aaKnown RBP8.64□□□□□ -1.03
LIP1YMR298W ENB1Q08299 606 aa8.64□□□□□ -1.03
LIP1YMR298W MCP1Q12106 302 aa8.64□□□□□ -1.03
LIP1YMR298W YOS9Q99220 542 aa8.64□□□□□ -1.03
LIP1YMR298W CAP2P13517 287 aa8.63□□□□□ -1.03
LIP1YMR298W EXG1P23776 448 aaKnown RBP8.63□□□□□ -1.03
LIP1YMR298W CWH43P25618 953 aa8.63□□□□□ -1.03
LIP1YMR298W BUD23P25627 275 aaPredicted RBP8.63□□□□□ -1.03
LIP1YMR298W FUN26P31381 517 aa8.63□□□□□ -1.03
LIP1YMR298W MSN4P33749 630 aa8.63□□□□□ -1.03
LIP1YMR298W SRL3P36167 246 aa8.63□□□□□ -1.03
LIP1YMR298W MAL32P38158 584 aa8.63□□□□□ -1.03
LIP1YMR298W SDP1P40479 209 aa8.63□□□□□ -1.03
LIP1YMR298W ATG18P43601 500 aa8.63□□□□□ -1.03
LIP1YMR298W SFH5P47008 294 aa8.63□□□□□ -1.03
LIP1YMR298W ARO8P53090 500 aaKnown RBP8.63□□□□□ -1.03
LIP1YMR298W MAL12P53341 584 aa8.63□□□□□ -1.03
LIP1YMR298W OGG1P53397 376 aaPredicted RBP8.63□□□□□ -1.03
LIP1YMR298W PAL1Q05518 499 aaKnown RBP8.63□□□□□ -1.03
LIP1YMR298W RGC1Q06108 1083 aaKnown RBP8.63□□□□□ -1.03
LIP1YMR298W COQ10Q08058 207 aa8.63□□□□□ -1.03
LIP1YMR298W RTN2Q12443 393 aa8.63□□□□□ -1.03
LIP1YMR298W FRE6Q12473 712 aa8.63□□□□□ -1.03
LIP1YMR298W SET6Q12529 373 aa8.63□□□□□ -1.03
LIP1YMR298W TOR2P32600 2474 aaKnown RBP8.63□□□□□ -1.03
LIP1YMR298W QCR7P00128 127 aa8.62□□□□□ -1.03
LIP1YMR298W HMG1P12683 1054 aa8.62□□□□□ -1.03
LIP1YMR298W FUN19P28003 413 aaPredicted RBP8.62□□□□□ -1.03
LIP1YMR298W MKS1P34072 584 aa8.62□□□□□ -1.03
LIP1YMR298W THI2P38141 450 aa8.62□□□□□ -1.03
LIP1YMR298W PAU24P38155 120 aa8.62□□□□□ -1.03
LIP1YMR298W CCZ1P38273 704 aa8.62□□□□□ -1.03
LIP1YMR298W MTC4P38335 694 aaKnown RBP8.62□□□□□ -1.03
LIP1YMR298W VBA2P38358 474 aaKnown RBP8.62□□□□□ -1.03
LIP1YMR298W OCA5P38738 679 aa8.62□□□□□ -1.03
LIP1YMR298W YJL193WP39542 402 aa8.62□□□□□ -1.03
LIP1YMR298W MIT1P40002 666 aa8.62□□□□□ -1.03
LIP1YMR298W AAD14P42884 376 aa8.62□□□□□ -1.03
LIP1YMR298W DUG1P43616 481 aaKnown RBP8.62□□□□□ -1.03
LIP1YMR298W LCL3P53153 274 aa8.62□□□□□ -1.03
LIP1YMR298W IMO32P53219 342 aa8.62□□□□□ -1.03
LIP1YMR298W MPP6P53725 186 aaPredicted RBP8.62□□□□□ -1.03
LIP1YMR298W EKI1Q03764 534 aa8.62□□□□□ -1.03
LIP1YMR298W TAZ1Q06510 381 aa8.62□□□□□ -1.03
LIP1YMR298W CYK3Q07533 885 aa8.62□□□□□ -1.03
LIP1YMR298W RRG7Q08774 242 aaPredicted RBP8.62□□□□□ -1.03
LIP1YMR298W PRP46Q12417 451 aaPredicted RBP8.62□□□□□ -1.03
LIP1YMR298W YPR1Q12458 312 aa8.62□□□□□ -1.03
LIP1YMR298W TAD3Q9URQ3 322 aa8.62□□□□□ -1.03
LIP1YMR298W COX1P00401 534 aa8.61□□□□□ -1.03
LIP1YMR298W CAN1P04817 590 aa8.61□□□□□ -1.03
LIP1YMR298W KIN28P06242 306 aa8.61□□□□□ -1.03
LIP1YMR298W PDE2P06776 526 aa8.61□□□□□ -1.03
LIP1YMR298W ARF1P11076 181 aaKnown RBP8.61□□□□□ -1.03
LIP1YMR298W NCP1P16603 691 aaKnown RBP8.61□□□□□ -1.03
LIP1YMR298W RPA135P22138 1203 aaKnown RBP8.61□□□□□ -1.03
LIP1YMR298W DOA4P32571 926 aa8.61□□□□□ -1.03
LIP1YMR298W EMP70P32802 667 aa8.61□□□□□ -1.03
LIP1YMR298W VPS17P32913 551 aa8.61□□□□□ -1.03
LIP1YMR298W SHE2P36068 246 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
LIP1YMR298W MRPL16P38064 232 aa8.61□□□□□ -1.03
LIP1YMR298W CHK1P38147 527 aa8.61□□□□□ -1.03
LIP1YMR298W YBR137WP38276 179 aa8.61□□□□□ -1.03
LIP1YMR298W MLH1P38920 769 aa8.61□□□□□ -1.03
LIP1YMR298W FET3P38993 636 aa8.61□□□□□ -1.03
LIP1YMR298W PHO90P39535 881 aa8.61□□□□□ -1.03
LIP1YMR298W SNO3P43544 222 aa8.61□□□□□ -1.03
LIP1YMR298W IRC6P43615 237 aa8.61□□□□□ -1.03
LIP1YMR298W PPT1P53043 513 aa8.61□□□□□ -1.03
LIP1YMR298W VOA1P53262 265 aa8.61□□□□□ -1.03
LIP1YMR298W YAT1P80235 687 aa8.61□□□□□ -1.03
LIP1YMR298W MRPL1Q04599 285 aa8.61□□□□□ -1.03
LIP1YMR298W DCR2Q05924 578 aa8.61□□□□□ -1.03
LIP1YMR298W BUR2Q05949 395 aa8.61□□□□□ -1.03
LIP1YMR298W UTP21Q06078 939 aaPredicted RBP8.61□□□□□ -1.03
LIP1YMR298W YOL073CQ08232 322 aa8.61□□□□□ -1.03
LIP1YMR298W YLR099W-AQ3E798 87 aa8.61□□□□□ -1.03
LIP1YMR298W HFA1P32874 2273 aa8.61□□□□□ -1.03
LIP1YMR298W GCN3P14741 305 aa8.6□□□□□ -1.03
LIP1YMR298W DAL82P21705 255 aa8.6□□□□□ -1.03
LIP1YMR298W MDH3P32419 343 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
LIP1YMR298W YHR180WP38868 163 aa8.6□□□□□ -1.03
LIP1YMR298W IRC18P47056 224 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms