RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W RRG9P40156 214 aa3.28□□□□□ -1.88
SPO20YMR017W FMP48P53233 369 aa3.28□□□□□ -1.88
SPO20YMR017W OKP1P53298 406 aa3.28□□□□□ -1.88
SPO20YMR017W INP2Q03824 705 aa3.28□□□□□ -1.88
SPO20YMR017W UBX2Q04228 584 aa3.28□□□□□ -1.88
SPO20YMR017W APC4Q04601 652 aa3.28□□□□□ -1.88
SPO20YMR017W PAA1Q12447 191 aaKnown RBP3.28□□□□□ -1.88
SPO20YMR017W YPR1Q12458 312 aa3.28□□□□□ -1.88
SPO20YMR017W MSS116P15424 664 aaKnown RBP3.27□□□□□ -1.89
SPO20YMR017W CKA2P19454 339 aa3.27□□□□□ -1.89
SPO20YMR017W COX10P21592 462 aa3.27□□□□□ -1.89
SPO20YMR017W FET3P38993 636 aa3.27□□□□□ -1.89
SPO20YMR017W BDH1P39714 382 aa3.27□□□□□ -1.89
SPO20YMR017W RIB4P50861 169 aaPredicted RBP3.27□□□□□ -1.89
SPO20YMR017W HST4P53688 370 aa3.27□□□□□ -1.89
SPO20YMR017W GCD2P12754 651 aaPredicted RBP3.26□□□□□ -1.89
SPO20YMR017W ERD1P16151 362 aa3.26□□□□□ -1.89
SPO20YMR017W MRPL20P22354 195 aaPredicted RBP3.26□□□□□ -1.89
SPO20YMR017W ZRT1P32804 376 aa3.26□□□□□ -1.89
SPO20YMR017W ZRT3P34240 503 aa3.26□□□□□ -1.89
SPO20YMR017W YHR035WP38769 630 aa3.26□□□□□ -1.89
SPO20YMR017W TRR2P38816 342 aa3.26□□□□□ -1.89
SPO20YMR017W PET8P38921 284 aa3.26□□□□□ -1.89
SPO20YMR017W PES4P39684 611 aa3.26□□□□□ -1.89
SPO20YMR017W DSE1P40077 573 aa3.26□□□□□ -1.89
SPO20YMR017W DBP6P53734 629 aaKnown RBP3.26□□□□□ -1.89
SPO20YMR017W APJ1P53940 528 aa3.26□□□□□ -1.89
SPO20YMR017W SAM4Q08985 325 aaKnown RBP3.26□□□□□ -1.89
SPO20YMR017W YDL211CQ12121 372 aa3.26□□□□□ -1.89
SPO20YMR017W MDY2Q12285 212 aa3.26□□□□□ -1.89
SPO20YMR017W DFM1Q12743 341 aaKnown RBP3.26□□□□□ -1.89
SPO20YMR017W CCH1P50077 2039 aa3.26□□□□□ -1.89
SPO20YMR017W SKG6P32900 734 aaPredicted RBP3.25□□□□□ -1.89
SPO20YMR017W SOP4P39543 234 aaPredicted RBP3.25□□□□□ -1.89
SPO20YMR017W PFS2P42841 465 aaKnown RBP3.25□□□□□ -1.89
SPO20YMR017W SNX41Q04053 625 aa3.25□□□□□ -1.89
SPO20YMR017W YMR111CQ04461 462 aaPredicted RBP3.25□□□□□ -1.89
SPO20YMR017W ECM19Q06011 112 aa3.25□□□□□ -1.89
SPO20YMR017W CUR1Q06469 252 aa3.25□□□□□ -1.89
SPO20YMR017W YPL245WQ12179 454 aaKnown RBP3.25□□□□□ -1.89
SPO20YMR017W CAR2P07991 424 aaKnown RBP3.24□□□□□ -1.89
SPO20YMR017W MNN9P39107 395 aaKnown RBP3.24□□□□□ -1.89
SPO20YMR017W PBP4Q07362 185 aaKnown RBP3.24□□□□□ -1.89
SPO20YMR017W PRM7Q12459 698 aa3.24□□□□□ -1.89
SPO20YMR017W BI3Q9ZZW7 517 aa3.24□□□□□ -1.89
SPO20YMR017W FAB1P34756 2278 aa3.24□□□□□ -1.89
SPO20YMR017W FMT1P32785 401 aa3.23□□□□□ -1.89
SPO20YMR017W YMR262WP38430 313 aa3.23□□□□□ -1.89
SPO20YMR017W SLM1P40485 686 aa3.23□□□□□ -1.89
SPO20YMR017W MIC19P43594 170 aa3.23□□□□□ -1.89
SPO20YMR017W VOA1P53262 265 aa3.23□□□□□ -1.89
SPO20YMR017W YGR266WP53326 701 aa3.23□□□□□ -1.89
SPO20YMR017W YNR066CP53752 436 aa3.23□□□□□ -1.89
SPO20YMR017W SMD1Q02260 146 aaPredicted RBP3.23□□□□□ -1.89
SPO20YMR017W GMC1Q04399 608 aa3.23□□□□□ -1.89
SPO20YMR017W UTP23Q12339 254 aaKnown RBP3.23□□□□□ -1.89
SPO20YMR017W INO2P26798 304 aa3.22□□□□□ -1.89
SPO20YMR017W RPB9P27999 122 aa3.22□□□□□ -1.89
SPO20YMR017W PRY2P36110 329 aa3.22□□□□□ -1.89
SPO20YMR017W YIL054WP40524 105 aa3.22□□□□□ -1.89
SPO20YMR017W YIR035CP40579 254 aa3.22□□□□□ -1.89
SPO20YMR017W CDC40P40968 455 aaPredicted RBP3.22□□□□□ -1.89
SPO20YMR017W LOH1P47055 219 aa3.22□□□□□ -1.89
SPO20YMR017W ZRG17P53735 605 aa3.22□□□□□ -1.89
SPO20YMR017W RRG8Q06109 277 aa3.22□□□□□ -1.89
SPO20YMR017W VAC14Q06708 880 aa3.22□□□□□ -1.89
SPO20YMR017W DIB1Q06819 143 aaPredicted RBP3.22□□□□□ -1.89
SPO20YMR017W TRM10Q12400 293 aa3.22□□□□□ -1.89
SPO20YMR017W SAR1P20606 190 aaKnown RBP3.21□□□□□ -1.9
SPO20YMR017W RPL5P26321 297 aaKnown RBP3.21□□□□□ -1.9
SPO20YMR017W YGL118CP53132 145 aa3.21□□□□□ -1.9
SPO20YMR017W APC9Q12107 265 aa3.21□□□□□ -1.9
SPO20YMR017W TFC7Q12415 435 aa3.21□□□□□ -1.9
SPO20YMR017W DCP1Q12517 231 aaPredicted RBP3.21□□□□□ -1.9
SPO20YMR017W TDH3P00359 332 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SPO20YMR017W RAD7P06779 565 aa3.2□□□□□ -1.9
SPO20YMR017W CPT1P17898 393 aa3.2□□□□□ -1.9
SPO20YMR017W AST1P35183 429 aa3.2□□□□□ -1.9
SPO20YMR017W MCH2P36032 473 aa3.2□□□□□ -1.9
SPO20YMR017W LOC1P43586 204 aaPredicted RBP3.2□□□□□ -1.9
SPO20YMR017W BIO4P53630 237 aa3.2□□□□□ -1.9
SPO20YMR017W YPR195CQ06594 109 aa3.2□□□□□ -1.9
SPO20YMR017W VIK1Q12045 647 aa3.2□□□□□ -1.9
SPO20YMR017W PFK27Q12471 397 aaPredicted RBP3.2□□□□□ -1.9
SPO20YMR017W LAG2Q92325 660 aa3.2□□□□□ -1.9
SPO20YMR017W IZH4Q99393 312 aa3.2□□□□□ -1.9
SPO20YMR017W CUP2P15315 225 aa3.19□□□□□ -1.9
SPO20YMR017W RPL16BP26785 198 aaKnown RBP3.19□□□□□ -1.9
SPO20YMR017W AGA2P32781 87 aa3.19□□□□□ -1.9
SPO20YMR017W YPC1P38298 316 aa3.19□□□□□ -1.9
SPO20YMR017W COX16P47081 118 aa3.19□□□□□ -1.9
SPO20YMR017W SWC4P53201 476 aa3.19□□□□□ -1.9
SPO20YMR017W CAX4P53223 239 aa3.19□□□□□ -1.9
SPO20YMR017W SEC13Q04491 297 aaKnown RBP3.19□□□□□ -1.9
SPO20YMR017W GPX1P36014 167 aa3.18□□□□□ -1.9
SPO20YMR017W SWD2P36104 329 aaPredicted RBP3.18□□□□□ -1.9
SPO20YMR017W SLX1P38324 304 aa3.18□□□□□ -1.9
SPO20YMR017W ASG7P46993 209 aa3.18□□□□□ -1.9
SPO20YMR017W UBC13P52490 153 aa3.18□□□□□ -1.9
SPO20YMR017W VTI1Q04338 217 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms