RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W ECM14P38836 430 aa2.41□□□□□ -2.02
SMD2YLR275W POP2P39008 433 aa2.41□□□□□ -2.02
SMD2YLR275W CAX4P53223 239 aa2.41□□□□□ -2.02
SMD2YLR275W STF1P01098 86 aa2.4□□□□□ -2.03
SMD2YLR275W RNR2P09938 399 aaKnown RBP2.4□□□□□ -2.03
SMD2YLR275W INO2P26798 304 aa2.4□□□□□ -2.03
SMD2YLR275W SDH4P37298 181 aa2.4□□□□□ -2.03
SMD2YLR275W LIN1P38852 340 aaPredicted RBP2.4□□□□□ -2.03
SMD2YLR275W YGL118CP53132 145 aa2.4□□□□□ -2.03
SMD2YLR275W SDS23P53172 527 aa2.4□□□□□ -2.03
SMD2YLR275W REP1P03871 373 aa2.39□□□□□ -2.03
SMD2YLR275W TKL2P33315 681 aa2.39□□□□□ -2.03
SMD2YLR275W SMF2P38778 549 aa2.39□□□□□ -2.03
SMD2YLR275W DSE1P40077 573 aa2.39□□□□□ -2.03
SMD2YLR275W BTT1P40314 149 aaPredicted RBP2.39□□□□□ -2.03
SMD2YLR275W SLM1P40485 686 aa2.39□□□□□ -2.03
SMD2YLR275W PMT4P46971 762 aa2.39□□□□□ -2.03
SMD2YLR275W YDR222WQ04925 415 aa2.39□□□□□ -2.03
SMD2YLR275W YDR262WQ12331 272 aa2.39□□□□□ -2.03
SMD2YLR275W GAL3P13045 520 aa2.38□□□□□ -2.03
SMD2YLR275W ALK2P32789 676 aaPredicted RBP2.38□□□□□ -2.03
SMD2YLR275W CSI1Q04368 295 aa2.38□□□□□ -2.03
SMD2YLR275W MGR3Q04472 501 aa2.38□□□□□ -2.03
SMD2YLR275W GTO3Q04806 366 aa2.38□□□□□ -2.03
SMD2YLR275W BUR2Q05949 395 aa2.38□□□□□ -2.03
SMD2YLR275W MRX9Q07349 420 aaKnown RBP2.38□□□□□ -2.03
SMD2YLR275W MIM1Q08176 113 aa2.38□□□□□ -2.03
SMD2YLR275W YPL264CQ08980 353 aa2.38□□□□□ -2.03
SMD2YLR275W REX3Q12090 404 aa2.38□□□□□ -2.03
SMD2YLR275W YPR063CQ12160 140 aa2.38□□□□□ -2.03
SMD2YLR275W PRM4Q12498 284 aa2.38□□□□□ -2.03
SMD2YLR275W VMA5P31412 392 aaKnown RBP2.37□□□□□ -2.03
SMD2YLR275W UTR5P32630 166 aa2.37□□□□□ -2.03
SMD2YLR275W PPQ1P32945 549 aa2.37□□□□□ -2.03
SMD2YLR275W CTM1P38818 585 aa2.37□□□□□ -2.03
SMD2YLR275W DTD1Q07648 150 aaKnown RBP2.37□□□□□ -2.03
SMD2YLR275W SGT2Q12118 346 aaKnown RBP2.37□□□□□ -2.03
SMD2YLR275W TRM10Q12400 293 aa2.37□□□□□ -2.03
SMD2YLR275W TFC7Q12415 435 aa2.37□□□□□ -2.03
SMD2YLR275W CDC37P06101 506 aaKnown RBP2.36□□□□□ -2.03
SMD2YLR275W SPS100P13130 326 aa2.36□□□□□ -2.03
SMD2YLR275W DAL81P21657 970 aa2.36□□□□□ -2.03
SMD2YLR275W MRPL20P22354 195 aaPredicted RBP2.36□□□□□ -2.03
SMD2YLR275W RBK1P25332 333 aa2.36□□□□□ -2.03
SMD2YLR275W SUR1P33300 382 aa2.36□□□□□ -2.03
SMD2YLR275W ASP1P38986 381 aaPredicted RBP2.36□□□□□ -2.03
SMD2YLR275W BUD13P46947 266 aaPredicted RBP2.36□□□□□ -2.03
SMD2YLR275W TAF6P53040 516 aa2.36□□□□□ -2.03
SMD2YLR275W YGL088WP53151 121 aa2.36□□□□□ -2.03
SMD2YLR275W PXR1P53335 271 aaPredicted RBP2.36□□□□□ -2.03
SMD2YLR275W RDL2Q08742 149 aaKnown RBP2.36□□□□□ -2.03
SMD2YLR275W RTC5Q12108 567 aaKnown RBP2.36□□□□□ -2.03
SMD2YLR275W RPL18AP0CX49 186 aaKnown RBP2.35□□□□□ -2.03
SMD2YLR275W RPL18BP0CX50 186 aaKnown RBP2.35□□□□□ -2.03
SMD2YLR275W ARO4P32449 370 aaKnown RBP2.35□□□□□ -2.03
SMD2YLR275W MEI5P32489 222 aa2.35□□□□□ -2.03
SMD2YLR275W BUD2P33314 1104 aa2.35□□□□□ -2.03
SMD2YLR275W MED8P38304 223 aa2.35□□□□□ -2.03
SMD2YLR275W SMC2P38989 1170 aaKnown RBP2.35□□□□□ -2.03
SMD2YLR275W END3P39013 349 aa2.35□□□□□ -2.03
SMD2YLR275W OSW5P40219 148 aa2.35□□□□□ -2.03
SMD2YLR275W AIM20P40451 204 aa2.35□□□□□ -2.03
SMD2YLR275W HSH155P49955 971 aaKnown RBP2.35□□□□□ -2.03
SMD2YLR275W YGR168CP53293 376 aa2.35□□□□□ -2.03
SMD2YLR275W PRO2P54885 456 aaKnown RBP2.35□□□□□ -2.03
SMD2YLR275W YPL113CQ02961 396 aa2.35□□□□□ -2.03
SMD2YLR275W RVB1Q03940 463 aaKnown RBP2.35□□□□□ -2.03
SMD2YLR275W VPS20Q04272 221 aa2.35□□□□□ -2.03
SMD2YLR275W STE23Q06010 1027 aa2.35□□□□□ -2.03
SMD2YLR275W MIG1P27705 504 aa2.34□□□□□ -2.03
SMD2YLR275W ACB1P31787 87 aa2.34□□□□□ -2.03
SMD2YLR275W YPS1P32329 569 aa2.34□□□□□ -2.03
SMD2YLR275W YDR089WP38966 869 aa2.34□□□□□ -2.03
SMD2YLR275W SSO2P39926 295 aa2.34□□□□□ -2.03
SMD2YLR275W ABZ2Q03266 374 aa2.34□□□□□ -2.03
SMD2YLR275W CAB5Q03941 241 aa2.34□□□□□ -2.03
SMD2YLR275W YLR297WQ05899 129 aa2.34□□□□□ -2.03
SMD2YLR275W DXO1Q06349 442 aa2.34□□□□□ -2.03
SMD2YLR275W YPL245WQ12179 454 aaKnown RBP2.34□□□□□ -2.03
SMD2YLR275W PET18P25362 215 aa2.33□□□□□ -2.04
SMD2YLR275W CSE1P33307 960 aa2.33□□□□□ -2.04
SMD2YLR275W SCC4P40090 624 aa2.33□□□□□ -2.04
SMD2YLR275W YFR045WP43617 309 aa2.33□□□□□ -2.04
SMD2YLR275W ACT1P60010 375 aaKnown RBP2.33□□□□□ -2.04
SMD2YLR275W YDR114CQ04597 100 aa2.33□□□□□ -2.04
SMD2YLR275W RLP24Q07915 199 aaKnown RBP2.33□□□□□ -2.04
SMD2YLR275W MDY2Q12285 212 aa2.33□□□□□ -2.04
SMD2YLR275W ERP3Q12403 225 aa2.33□□□□□ -2.04
SMD2YLR275W CBP2P03874 630 aaPredicted RBP2.32□□□□□ -2.04
SMD2YLR275W MET2P08465 486 aa2.32□□□□□ -2.04
SMD2YLR275W SWC5P38326 303 aa2.32□□□□□ -2.04
SMD2YLR275W PET8P38921 284 aa2.32□□□□□ -2.04
SMD2YLR275W PES4P39684 611 aa2.32□□□□□ -2.04
SMD2YLR275W UTP25P40498 721 aaKnown RBP2.32□□□□□ -2.04
SMD2YLR275W ECO1P43605 281 aa2.32□□□□□ -2.04
SMD2YLR275W YNR066CP53752 436 aa2.32□□□□□ -2.04
SMD2YLR275W YLR012CQ07927 99 aa2.32□□□□□ -2.04
SMD2YLR275W IES3Q12345 250 aa2.32□□□□□ -2.04
SMD2YLR275W GCD2P12754 651 aaPredicted RBP2.31□□□□□ -2.04
SMD2YLR275W EDC2P40023 145 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms