RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	YIL054W	P40524	105 aa		2.28	□□□□□ -2.04
YPT6	YLR262C	NAS2	P40555	220 aa		2.28	□□□□□ -2.04
YPT6	YLR262C	RVB1	Q03940	463 aa	Known RBP	2.28	□□□□□ -2.04
YPT6	YLR262C	YDR262W	Q12331	272 aa		2.28	□□□□□ -2.04
YPT6	YLR262C	TFC7	Q12415	435 aa		2.28	□□□□□ -2.04
YPT6	YLR262C	PRP46	Q12417	451 aa	Predicted RBP	2.28	□□□□□ -2.04
YPT6	YLR262C	ERD1	P16151	362 aa		2.27	□□□□□ -2.05
YPT6	YLR262C	VMA5	P31412	392 aa	Known RBP	2.27	□□□□□ -2.05
YPT6	YLR262C	YKL187C	P34231	750 aa		2.27	□□□□□ -2.05
YPT6	YLR262C	LIN1	P38852	340 aa	Predicted RBP	2.27	□□□□□ -2.05
YPT6	YLR262C	GTO3	Q04806	366 aa		2.27	□□□□□ -2.05
YPT6	YLR262C	YDR286C	Q05530	114 aa		2.27	□□□□□ -2.05
YPT6	YLR262C	DIB1	Q06819	143 aa	Predicted RBP	2.27	□□□□□ -2.05
YPT6	YLR262C	CDC42	P19073	191 aa		2.26	□□□□□ -2.05
YPT6	YLR262C	YJL144W	P47009	104 aa		2.26	□□□□□ -2.05
YPT6	YLR262C	YPL080C	Q02826	108 aa		2.26	□□□□□ -2.05
YPT6	YLR262C	VTI1	Q04338	217 aa		2.26	□□□□□ -2.05
YPT6	YLR262C	YPR096C	O13587	100 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	RNR2	P09938	399 aa	Known RBP	2.25	□□□□□ -2.05
YPT6	YLR262C	RPL18A	P0CX49	186 aa	Known RBP	2.25	□□□□□ -2.05
YPT6	YLR262C	RPL18B	P0CX50	186 aa	Known RBP	2.25	□□□□□ -2.05
YPT6	YLR262C	GAL3	P13045	520 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	SUR1	P33300	382 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	MIC19	P43594	170 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	FYV8	P46949	817 aa	Known RBP	2.25	□□□□□ -2.05
YPT6	YLR262C	SHE4	P51534	789 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	YNR066C	P53752	436 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	STE23	Q06010	1027 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	TRM10	Q12400	293 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	PRM4	Q12498	284 aa		2.25	□□□□□ -2.05
YPT6	YLR262C	CBP2	P03874	630 aa	Predicted RBP	2.24	□□□□□ -2.05
YPT6	YLR262C	DAL5	P15365	543 aa		2.24	□□□□□ -2.05
YPT6	YLR262C	DAL81	P21657	970 aa		2.24	□□□□□ -2.05
YPT6	YLR262C	INO2	P26798	304 aa		2.24	□□□□□ -2.05
YPT6	YLR262C	YPS1	P32329	569 aa		2.24	□□□□□ -2.05
YPT6	YLR262C	UIP5	P36137	443 aa		2.24	□□□□□ -2.05
YPT6	YLR262C	ASP1	P38986	381 aa	Predicted RBP	2.24	□□□□□ -2.05
YPT6	YLR262C	YGR016W	P53209	190 aa		2.24	□□□□□ -2.05
YPT6	YLR262C	YLR012C	Q07927	99 aa		2.24	□□□□□ -2.05
YPT6	YLR262C	YPL264C	Q08980	353 aa		2.24	□□□□□ -2.05
YPT6	YLR262C	PPQ1	P32945	549 aa		2.23	□□□□□ -2.05
YPT6	YLR262C	BUD2	P33314	1104 aa		2.23	□□□□□ -2.05
YPT6	YLR262C	YKL162C	P36052	402 aa		2.23	□□□□□ -2.05
YPT6	YLR262C	YBR062C	P38239	180 aa		2.23	□□□□□ -2.05
YPT6	YLR262C	ECM14	P38836	430 aa		2.23	□□□□□ -2.05
YPT6	YLR262C	AIM20	P40451	204 aa		2.23	□□□□□ -2.05
YPT6	YLR262C	IRC4	Q03036	179 aa		2.23	□□□□□ -2.05
YPT6	YLR262C	DXO1	Q06349	442 aa		2.23	□□□□□ -2.05
YPT6	YLR262C	DTD1	Q07648	150 aa	Known RBP	2.23	□□□□□ -2.05
YPT6	YLR262C	ACB1	P31787	87 aa		2.22	□□□□□ -2.05
YPT6	YLR262C	ZRT1	P32804	376 aa		2.22	□□□□□ -2.05
YPT6	YLR262C	SDH4	P37298	181 aa		2.22	□□□□□ -2.05
YPT6	YLR262C	SOP4	P39543	234 aa	Predicted RBP	2.22	□□□□□ -2.05
YPT6	YLR262C	YFL040W	P43562	540 aa		2.22	□□□□□ -2.05
YPT6	YLR262C	ACT1	P60010	375 aa	Known RBP	2.22	□□□□□ -2.05
YPT6	YLR262C	YMR111C	Q04461	462 aa	Predicted RBP	2.22	□□□□□ -2.05
YPT6	YLR262C	YPR063C	Q12160	140 aa		2.22	□□□□□ -2.05
YPT6	YLR262C	YPL245W	Q12179	454 aa	Known RBP	2.22	□□□□□ -2.05
YPT6	YLR262C	HPR1	P17629	752 aa	Known RBP	2.21	□□□□□ -2.06
YPT6	YLR262C	ARO4	P32449	370 aa	Known RBP	2.21	□□□□□ -2.06
YPT6	YLR262C	TKL2	P33315	681 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	GPX1	P36014	167 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	SMC2	P38989	1170 aa	Known RBP	2.21	□□□□□ -2.06
YPT6	YLR262C	EDC2	P40023	145 aa	Predicted RBP	2.21	□□□□□ -2.06
YPT6	YLR262C	YIL012W	P40551	113 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	ECO1	P43605	281 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	SNX41	Q04053	625 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	UBX2	Q04228	584 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	SEC13	Q04491	297 aa	Known RBP	2.21	□□□□□ -2.06
YPT6	YLR262C	YOR292C	Q08743	309 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	PGC1	Q08959	321 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	SGT2	Q12118	346 aa	Known RBP	2.21	□□□□□ -2.06
YPT6	YLR262C	ERP3	Q12403	225 aa		2.21	□□□□□ -2.06
YPT6	YLR262C	YCR025C	P25352	136 aa		2.2	□□□□□ -2.06
YPT6	YLR262C	ALK2	P32789	676 aa	Predicted RBP	2.2	□□□□□ -2.06
YPT6	YLR262C	YNL040W	P53960	456 aa	Predicted RBP	2.2	□□□□□ -2.06
YPT6	YLR262C	CSI1	Q04368	295 aa		2.2	□□□□□ -2.06
YPT6	YLR262C	PBP4	Q07362	185 aa	Known RBP	2.2	□□□□□ -2.06
YPT6	YLR262C	RLP24	Q07915	199 aa	Known RBP	2.2	□□□□□ -2.06
YPT6	YLR262C	YPL278C	Q08990	100 aa		2.2	□□□□□ -2.06
YPT6	YLR262C	IES3	Q12345	250 aa		2.2	□□□□□ -2.06
YPT6	YLR262C	MET2	P08465	486 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	PRE7	P23724	241 aa	Known RBP	2.19	□□□□□ -2.06
YPT6	YLR262C	MIG1	P27705	504 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	YPC1	P38298	316 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	FET3	P38993	636 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	CAJ1	P39101	391 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	UTP25	P40498	721 aa	Known RBP	2.19	□□□□□ -2.06
YPT6	YLR262C	INA22	P40576	216 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	YPL113C	Q02961	396 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	ABZ2	Q03266	374 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	MIX17	Q03667	156 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	CAB5	Q03941	241 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	YDR114C	Q04597	100 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	SAM4	Q08985	325 aa	Known RBP	2.19	□□□□□ -2.06
YPT6	YLR262C	VIK1	Q12045	647 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	UTP23	Q12339	254 aa	Known RBP	2.19	□□□□□ -2.06
YPT6	YLR262C	YPR1	Q12458	312 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	LAG2	Q92325	660 aa		2.19	□□□□□ -2.06
YPT6	YLR262C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.18	□□□□□ -2.06	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms