RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC42	YLR229C	DHR2	P36009	735 aa	Predicted RBP	4.09	□□□□□ -1.75
CDC42	YLR229C	APL3	P38065	1025 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	PRE6	P40303	254 aa	Known RBP	4.09	□□□□□ -1.75
CDC42	YLR229C	MPM1	P40364	252 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	LSM8	P47093	109 aa	Known RBP	4.09	□□□□□ -1.75
CDC42	YLR229C	JAC1	P53193	184 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	CAF40	P53829	373 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	SNZ1	Q03148	297 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	RSM28	Q03430	361 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	ARG7	Q04728	441 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	RRG7	Q08774	242 aa	Predicted RBP	4.09	□□□□□ -1.75
CDC42	YLR229C	VPS68	Q12016	184 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	DIN7	Q12086	430 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	AEP3	Q12089	606 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	SIA1	Q12212	622 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	APC2	Q12440	853 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	MPD2	Q99316	277 aa		4.09	□□□□□ -1.75
CDC42	YLR229C	INH1	P01097	85 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-LR1	P0C2J4	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-F	P0CX61	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-GR2	P0CX62	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	RPL3	P14126	387 aa	Known RBP	4.08	□□□□□ -1.76
CDC42	YLR229C	PRP28	P23394	588 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	CNB1	P25296	175 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-C	P25383	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	ITR1	P30605	584 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	SNC1	P31109	117 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	ACB1	P31787	87 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	OAC1	P32332	324 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	SRB6	P32570	121 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	MGM101	P32787	269 aa	Known RBP	4.08	□□□□□ -1.76
CDC42	YLR229C	SUR1	P33300	382 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CDC42	YLR229C	CBP4	P37267	147 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	YBR137W	P38276	179 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TAE1	P38340	232 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	AXL2	P38928	823 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	GGC1	P38988	300 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	SEN34	P39707	275 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	GDI1	P39958	451 aa	Known RBP	4.08	□□□□□ -1.76
CDC42	YLR229C	GET2	P40056	285 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	HIS6	P40545	261 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TIR3	P40552	269 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	YGR201C	P42936	225 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	YFR020W	P43600	232 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	BUL1	P48524	976 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	COS12	P53053	380 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	MPC1	P53157	130 aa	Known RBP	4.08	□□□□□ -1.76
CDC42	YLR229C	BUD17	P53727	317 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	MNT4	P53745	580 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	IGO1	P53897	168 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	AQR1	P53943	586 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-DR2	Q03483	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	SWF1	Q04629	336 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	MFB1	Q04922	465 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	BUR2	Q05949	395 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	SPO77	Q06134	477 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	DCS1	Q06151	350 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	ARV1	Q06541	321 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	YOR283W	Q12040	230 aa	Known RBP	4.08	□□□□□ -1.76
CDC42	YLR229C	RTC5	Q12108	567 aa	Known RBP	4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-B	Q12260	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-OR2	Q12293	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-DR1	Q12392	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-OR1	Q12439	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	MRX4	Q12467	430 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	TY2A-DR3	Q99303	438 aa		4.08	□□□□□ -1.76
CDC42	YLR229C	YEL009C-A	A0A023PZF2	135 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	QCR7	P00128	127 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	COX3	P00420	269 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	RPS14A	P06367	137 aa	Known RBP	4.07	□□□□□ -1.76
CDC42	YLR229C	SPT15	P13393	240 aa	Known RBP	4.07	□□□□□ -1.76
CDC42	YLR229C	BET2	P20133	325 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	RPS1B	P23248	255 aa	Known RBP	4.07	□□□□□ -1.76
CDC42	YLR229C	YCK1	P23291	538 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	IDH2	P28241	369 aa	Known RBP	4.07	□□□□□ -1.76
CDC42	YLR229C	WBP1	P33767	430 aa	Known RBP	4.07	□□□□□ -1.76
CDC42	YLR229C	KKQ8	P36004	724 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	VPS51	P36116	164 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	ECM31	P38122	312 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	RTC2	P38279	296 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	NSG1	P38837	291 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	RPS14B	P39516	138 aa	Known RBP	4.07	□□□□□ -1.76
CDC42	YLR229C	RCY1	P39531	840 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	YER184C	P39961	794 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	RMD6	P39975	231 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	HPA3	P39979	161 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	LAS21	P40367	830 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	YIL077C	P40508	320 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	AZF1	P41696	914 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	CAK1	P43568	368 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC42	YLR229C	RPE1	P46969	238 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	YJL043W	P47053	257 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	MOG1	P47123	218 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	IMO32	P53219	342 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	SLI1	P53304	468 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	TDA7	P53882	636 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC42	YLR229C	BNA7	Q04066	261 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	STP4	Q07351	490 aa		4.07	□□□□□ -1.76
CDC42	YLR229C	PLB3	Q08108	686 aa		4.07	□□□□□ -1.76

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