RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W MGR3Q04472 501 aa8.98□□□□□ -0.97
SHH4YLR164W BUR2Q05949 395 aa8.98□□□□□ -0.97
SHH4YLR164W MLC2Q06580 163 aa8.98□□□□□ -0.97
SHH4YLR164W MDM36Q06820 579 aa8.98□□□□□ -0.97
SHH4YLR164W CPR2P23285 205 aa8.97□□□□□ -0.97
SHH4YLR164W PPA2P28239 310 aa8.97□□□□□ -0.97
SHH4YLR164W PDR3P33200 976 aa8.97□□□□□ -0.97
SHH4YLR164W SLC1P33333 303 aa8.97□□□□□ -0.97
SHH4YLR164W GPX2P38143 162 aa8.97□□□□□ -0.97
SHH4YLR164W NVJ1P38881 321 aa8.97□□□□□ -0.97
SHH4YLR164W YTA6P40328 754 aa8.97□□□□□ -0.97
SHH4YLR164W YIL165CP40446 119 aa8.97□□□□□ -0.97
SHH4YLR164W YJL218WP40892 196 aaKnown RBP8.97□□□□□ -0.97
SHH4YLR164W PFS2P42841 465 aaKnown RBP8.97□□□□□ -0.97
SHH4YLR164W ECO1P43605 281 aa8.97□□□□□ -0.97
SHH4YLR164W MDE1P47095 244 aa8.97□□□□□ -0.97
SHH4YLR164W YGR054WP53235 642 aaKnown RBP8.97□□□□□ -0.97
SHH4YLR164W YGR126WP53274 230 aa8.97□□□□□ -0.97
SHH4YLR164W MNT4P53745 580 aa8.97□□□□□ -0.97
SHH4YLR164W FDC1Q03034 503 aa8.97□□□□□ -0.97
SHH4YLR164W RSM10Q03201 203 aa8.97□□□□□ -0.97
SHH4YLR164W MIX14Q04341 121 aa8.97□□□□□ -0.97
SHH4YLR164W AGE1Q04412 482 aa8.97□□□□□ -0.97
SHH4YLR164W BRE4Q07660 1125 aa8.97□□□□□ -0.97
SHH4YLR164W ACF2Q12168 779 aa8.97□□□□□ -0.97
SHH4YLR164W EHD3P28817 500 aa8.96□□□□□ -0.98
SHH4YLR164W TPO5P36029 618 aa8.96□□□□□ -0.98
SHH4YLR164W DDI1P40087 428 aa8.96□□□□□ -0.98
SHH4YLR164W YIL169CP40442 995 aa8.96□□□□□ -0.98
SHH4YLR164W HIS6P40545 261 aa8.96□□□□□ -0.98
SHH4YLR164W PHB1P40961 287 aa8.96□□□□□ -0.98
SHH4YLR164W SCS7Q03529 384 aa8.96□□□□□ -0.98
SHH4YLR164W YDR249CQ03787 373 aa8.96□□□□□ -0.98
SHH4YLR164W RDL2Q08742 149 aaKnown RBP8.96□□□□□ -0.98
SHH4YLR164W YPL278CQ08990 100 aa8.96□□□□□ -0.98
SHH4YLR164W FLO9P39712 1322 aa8.96□□□□□ -0.98
SHH4YLR164W GIT1P25346 518 aa8.95□□□□□ -0.98
SHH4YLR164W YCR102CP25608 368 aa8.95□□□□□ -0.98
SHH4YLR164W DTR1P38125 572 aa8.95□□□□□ -0.98
SHH4YLR164W THI2P38141 450 aa8.95□□□□□ -0.98
SHH4YLR164W BUR6P40096 142 aa8.95□□□□□ -0.98
SHH4YLR164W JLP2P40206 208 aa8.95□□□□□ -0.98
SHH4YLR164W SFH5P47008 294 aa8.95□□□□□ -0.98
SHH4YLR164W SAM37P50110 327 aa8.95□□□□□ -0.98
SHH4YLR164W YGR066CP53242 292 aa8.95□□□□□ -0.98
SHH4YLR164W VOA1P53262 265 aa8.95□□□□□ -0.98
SHH4YLR164W SAY1P53324 424 aa8.95□□□□□ -0.98
SHH4YLR164W MKC7P53379 596 aa8.95□□□□□ -0.98
SHH4YLR164W CPR8P53728 308 aa8.95□□□□□ -0.98
SHH4YLR164W SPC19Q03954 165 aa8.95□□□□□ -0.98
SHH4YLR164W GPI17Q04080 534 aa8.95□□□□□ -0.98
SHH4YLR164W HLR1Q04429 423 aa8.95□□□□□ -0.98
SHH4YLR164W YMR252CQ04814 134 aa8.95□□□□□ -0.98
SHH4YLR164W YMR315WQ04869 349 aaKnown RBP8.95□□□□□ -0.98
SHH4YLR164W YLR346CQ06139 101 aa8.95□□□□□ -0.98
SHH4YLR164W YDL114WQ07530 308 aa8.95□□□□□ -0.98
SHH4YLR164W MSL5Q12186 476 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
SHH4YLR164W YOL114CQ12322 202 aa8.95□□□□□ -0.98
SHH4YLR164W LSO1Q3E827 93 aa8.95□□□□□ -0.98
SHH4YLR164W YEL009C-AA0A023PZF2 135 aa8.94□□□□□ -0.98
SHH4YLR164W OPI3P05375 206 aa8.94□□□□□ -0.98
SHH4YLR164W PDE2P06776 526 aa8.94□□□□□ -0.98
SHH4YLR164W YHR214C-DP0CX93 97 aa8.94□□□□□ -0.98
SHH4YLR164W ERG8P24521 451 aa8.94□□□□□ -0.98
SHH4YLR164W ERG4P25340 473 aa8.94□□□□□ -0.98
SHH4YLR164W COS9P36034 407 aa8.94□□□□□ -0.98
SHH4YLR164W YBR063CP38083 404 aa8.94□□□□□ -0.98
SHH4YLR164W CHK1P38147 527 aa8.94□□□□□ -0.98
SHH4YLR164W SHO1P40073 367 aa8.94□□□□□ -0.98
SHH4YLR164W REE1P40893 198 aa8.94□□□□□ -0.98
SHH4YLR164W PRY1P47032 299 aa8.94□□□□□ -0.98
SHH4YLR164W YAE1P47118 141 aaPredicted RBP8.94□□□□□ -0.98
SHH4YLR164W ECL1P48235 211 aa8.94□□□□□ -0.98
SHH4YLR164W LYS5P50113 272 aa8.94□□□□□ -0.98
SHH4YLR164W OGG1P53397 376 aaPredicted RBP8.94□□□□□ -0.98
SHH4YLR164W RSM24Q03976 319 aa8.94□□□□□ -0.98
SHH4YLR164W RBS1Q05672 457 aaKnown RBP8.94□□□□□ -0.98
SHH4YLR164W YPR147CQ06522 304 aaKnown RBP8.94□□□□□ -0.98
SHH4YLR164W IRC19Q07843 230 aa8.94□□□□□ -0.98
SHH4YLR164W HMS1Q12398 434 aa8.94□□□□□ -0.98
SHH4YLR164W YOR032W-AQ8TGS1 66 aa8.94□□□□□ -0.98
SHH4YLR164W SEC12P11655 471 aa8.93□□□□□ -0.98
SHH4YLR164W RPA135P22138 1203 aaKnown RBP8.93□□□□□ -0.98
SHH4YLR164W AIM17P23180 465 aaKnown RBP8.93□□□□□ -0.98
SHH4YLR164W CLB2P24869 491 aa8.93□□□□□ -0.98
SHH4YLR164W NFS1P25374 497 aa8.93□□□□□ -0.98
SHH4YLR164W FUN19P28003 413 aaPredicted RBP8.93□□□□□ -0.98
SHH4YLR164W ECT1P33412 323 aa8.93□□□□□ -0.98
SHH4YLR164W PTH1P38876 190 aaKnown RBP8.93□□□□□ -0.98
SHH4YLR164W PHO90P39535 881 aa8.93□□□□□ -0.98
SHH4YLR164W RFC4P40339 323 aaKnown RBP8.93□□□□□ -0.98
SHH4YLR164W IMO32P53219 342 aa8.93□□□□□ -0.98
SHH4YLR164W PBP1P53297 722 aaKnown RBP8.93□□□□□ -0.98
SHH4YLR164W SRL4Q03085 281 aa8.93□□□□□ -0.98
SHH4YLR164W TFB3Q03290 321 aa8.93□□□□□ -0.98
SHH4YLR164W UTP21Q06078 939 aaPredicted RBP8.93□□□□□ -0.98
SHH4YLR164W TY1A-BLQ12266 440 aa8.93□□□□□ -0.98
SHH4YLR164W TY1A-NL1Q12391 440 aaKnown RBP8.93□□□□□ -0.98
SHH4YLR164W YAL064W-BO13512 126 aa8.92□□□□□ -0.98
SHH4YLR164W REP1P03871 373 aa8.92□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms